📄 streg.dlg
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/*
streg
*! VERSION 1.1.2 13mar2005
*/
VERSION 9.0
INCLUDE _std_large
INCLUDE _ht330
INCLUDE header
HELP hlp1, view("help streg")
RESET res1
DIALOG main, label("streg - Fit parametric survival model") tabtitle("Model")
BEGIN
DEFINE _x _xsetbu
DEFINE _y _top
INCLUDE _bu_stset
TEXT tx_iv _lft _topph _cwd1 ., /*
*/ label("Independent variables:") /*
*/
VARLIST vl_iv _lft _ss _iwd ., /*
*/ label("Independent variables") /*
*/
CHECKBOX ck_nocons @ _ms @ ., /*
*/label("Suppress constant term") option(noconstant)
GROUPBOX gb_model _lft _ls _iwd _ht6, /*
*/ label("Survival distribution") /*
*/
RADIO rb_exp _indent _ss _cwd2 ., /*
*/ label("Exponential") /*
*/ clickon("script exp") /*
*/ first /*
*/ option("dist(exponential)") /*
*/
RADIO rb_weib _lft2 @ @ ., /*
*/ label("Weibull") /*
*/ clickon("script weib") /*
*/ option("dist(weibull)") /*
*/
RADIO rb_gomp _ilft _ss @ ., /*
*/ label("Gompertz") /*
*/ clickon("script gomp") /*
*/ option("dist(gompertz)") /*
*/
RADIO rb_logn _lft2 @ @ ., /*
*/ label("Log normal") /*
*/ clickon("script logn") /*
*/ option("dist(lognormal)") /*
*/
RADIO rb_logl _ilft _ss @ ., /*
*/ label("Log logistic") /*
*/ clickon("script logl") /*
*/ option("dist(loglogistic)") /*
*/
RADIO rb_gamma _lft2 @ @ ., /*
*/ label("Generalized gamma") /*
*/ clickon("script gamma") /*
*/ last /*
*/ option("dist(gamma)") /*
*/
CHECKBOX ck_frailty _lft _xls _iwd _ht2, /*
*/ label("Frailty distribution") /*
*/ groupbox /*
*/ clickon("script frailty_on") /*
*/ clickoff("script frailty_off") /*
*/
RADIO rb_fgamma _indent _ss _cwd2 ., /*
*/ label("Gamma") /*
*/ first /*
*/ option("frailty(gamma)") /*
*/
RADIO rb_figaus _lft2 @ @ ., /*
*/ label("Inverse-Gaussian") /*
*/ last /*
*/ option("frailty(invgaussian)") /*
*/
CHECKBOX ck_time _lft _xls _cwd1 ., /*
*/ label("Use accelerated failure-time metric") /*
*/ clickon("program time_tr_pr") /*
*/ clickoff("program time_tr_pr") /*
*/ option("time") /*
*/
END
SCRIPT PREINIT
BEGIN
script se_createAsJknifeBstrapML
END
PROGRAM check4shared
BEGIN
if !main.ck_frailty {
model2.tx_shared.disable
model2.vn_shared.disable
}
call program shared_on
END
SCRIPT frailty_on
BEGIN
main.rb_fgamma.enable
main.rb_figaus.enable
model2.tx_strata.disable
model2.vn_strata.disable
program check4shared
model2.tx_anc.disable
model2.vl_anc.disable
model2.tx_anc2.disable
model2.vl_anc2.disable
rpt.ck_nolr.enable
END
SCRIPT frailty_off
BEGIN
main.rb_fgamma.disable
main.rb_figaus.disable
model2.tx_strata.enable
model2.vn_strata.enable
program check4shared
program ancillary_pr
rpt.ck_nolr.disable
END
SCRIPT ancillary_pr
BEGIN
if main.rb_exp {
script exp
}
if main.rb_weib {
script weib
}
if main.rb_gomp {
script comp
}
if main.rb_logn {
script logn
}
if main.rb_logl {
script logl
}
if main.rb_gamma {
script gamma
}
END
PROGRAM time_tr_pr
BEGIN
if main.rb_logl | main.rb_logn | main.rb_gamma {
call gaction main.ck_time.disable
call gaction rpt.ck_tr.enable
}
if main.rb_exp | main.rb_weib {
call gaction main.ck_time.enable
if main.ck_time {
call gaction rpt.ck_tr.disable
}
if ! main.ck_time {
call gaction rpt.ck_tr.enable
}
}
if main.rb_gomp {
call gaction main.ck_time.disable
call gaction rpt.ck_tr.disable
}
END
SCRIPT exp
BEGIN
rpt.ck_nohr.enable
program time_tr_pr
program shared_on
model2.tx_anc.disable
model2.vl_anc.disable
model2.tx_anc2.disable
model2.vl_anc2.disable
END
SCRIPT weib
BEGIN
rpt.ck_nohr.enable
program time_tr_pr
program shared_on
model2.tx_anc.enable
model2.vl_anc.enable
model2.tx_anc2.disable
model2.vl_anc2.disable
END
SCRIPT gomp
BEGIN
rpt.ck_nohr.enable
program time_tr_pr
program shared_on
model2.tx_anc.enable
model2.vl_anc.enable
model2.tx_anc2.disable
model2.vl_anc2.disable
END
SCRIPT logn
BEGIN
rpt.ck_nohr.disable
program time_tr_pr
program shared_on
model2.tx_anc.enable
model2.vl_anc.enable
model2.tx_anc2.disable
model2.vl_anc2.disable
END
SCRIPT logl
BEGIN
rpt.ck_nohr.disable
program time_tr_pr
program shared_on
model2.tx_anc.enable
model2.vl_anc.enable
model2.tx_anc2.disable
model2.vl_anc2.disable
END
SCRIPT gamma
BEGIN
rpt.ck_nohr.disable
program time_tr_pr
program shared_off
model2.tx_anc.enable
model2.vl_anc.enable
model2.tx_anc2.enable
model2.vl_anc2.enable
END
PROGRAM shared_off
BEGIN
call gaction model2.tx_shared.disable
call gaction model2.vn_shared.disable
END
PROGRAM shared_on
BEGIN
if main.ck_frailty & ! main.rb_gamma {
call gaction model2.tx_shared.enable
call gaction model2.vn_shared.enable
}
END
DIALOG model2, tabtitle("Model 2")
BEGIN
GROUPBOX gb_opts _lft _top _iwd _ht25, /*
*/ label("Options")
TEXT tx_strata _ilft _ms _cwd3_2 ., /*
*/ label("Strata ID variable:") /*
*/
DEFINE y @y
VARNAME vn_strata @ _ss @ ., /*
*/ label("Strata ID variable") /*
*/ option("strata") /*
*/
TEXT tx_offset _ilft3_2 y @ ., /*
*/label("Offset variable:")
VARNAME vn_offset @ _ss @ ., /*
*/label("Offset variable") option(offset)
TEXT tx_shared _ilft _ls _cwd2 ., /*
*/ label("Shared frailty ID variable:") /*
*/
VARNAME vn_shared @ _ss _cwd3_2 ., /*
*/ label("Shared frailty ID variable") /*
*/ option("shared") /*
*/
TEXT tx_anc _ilft _ls _ibwd ., /*
*/ label("Independent variables to model the first ancillary parameter:")/*
*/
VARLIST vl_anc @ _ss @ ., /*
*/ label("Model variables for first ancillary parameter")/*
*/ option("ancillary") /*
*/
TEXT tx_anc2 @ _ls @ ., /*
*/ label("Independent variables to model the second ancillary parameter:")/*
*/
VARLIST vl_anc2 @ _ss @ ., /*
*/ label("Model variables for second ancillary parameter")/*
*/ option("anc2") /*
*/
DEFINE _x _ilft
DEFINE _cx _ibwd
DEFINE _y _ls
INCLUDE _constraints
END
INCLUDE byifin
INCLUDE se
DIALOG rpt, tabtitle("Reporting")
BEGIN
DEFINE _x _lft
DEFINE _cx _spr2
DEFINE _y _top
INCLUDE _sp_level
DEFINE y @y
CHECKBOX ck_nohr _lft _ls _cwd0 ., /*
*/ label("Do not report hazard ratios") /*
*/ option("nohr") /*
*/
CHECKBOX ck_tr @ _ms @ ., /*
*/ label("Report time ratios") /*
*/ option("tr") /*
*/
CHECKBOX ck_noshow @ _ms @ ., /*
*/ label("Do not report st variable descriptions") /*
*/ option("noshow") /*
*/
CHECKBOX ck_nohead @ _ms @ ., /*
*/label("Do not display output header") option(noheader)
CHECKBOX ck_nolr @ _ms @ ., /*
*/label("Do not perform likelihood-ratio test") /*
*/option("nolrtest")
END
INCLUDE max_ml
PROGRAM command
BEGIN
allowxi
INCLUDE _by_pr
put "streg "
varlist [main.vl_iv]
INCLUDE _ifin_pr
beginoptions
option main.ck_nocons
option radio(main rb_exp rb_weib rb_gomp rb_logn rb_logl rb_gamma)
if main.ck_frailty {
option radio(main rb_fgamma rb_figaus)
}
option main.ck_time
optionarg model2.vn_strata
optionarg model2.vn_offset
optionarg model2.vn_shared
optionarg model2.vl_anc
optionarg model2.vl_anc2
optionarg model2.cb_constr
put " " /program se_output
optionarg /hidedefault rpt.sp_level
option rpt.ck_nohr
option rpt.ck_tr
option rpt.ck_noshow
option rpt.ck_nohead
option rpt.ck_nolr
put " " /program max_output
endoptions
END
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