📄 svygnbreg.ado
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*! version 1.0.10 20dec2004
program svygnbreg, sortpreserve
version 8
if replay() {
if "`e(cmd)'" != "svygnbreg" {
error 301
}
syntax [, IRr * ]
svyopts invalid diopts , `options'
local diopts `diopts' `irr'
if "`invalid'" != "" {
di as err "`invalid' : invalid options for replay"
exit 198
}
Display, `diopts'
exit
}
else Estimate `0'
end
program define Estimate, eclass
/* Parse. */
syntax varlist(numeric) /*
*/ [pw iw] /* see _svy_newrule.ado
*/ [if] [in] /*
*/ [, /*
*/ noCONstant /* my options
*/ LOg /*
*/ Exposure(varname numeric) /*
*/ LNAlpha(varlist numeric) /*
*/ IRr /*
*/ FROM(string) /*
*/ OFFset(varname numeric) /*
*/ SCore(string) /*
*/ svy /* ignored
*/ noDISPLAY /*
*/ STRata(passthru) /* see _svy_newrule.ado
*/ PSU(passthru) /* see _svy_newrule.ado
*/ FPC(passthru) /* see _svy_newrule.ado
*/ * /* svy/ml/display options
*/ ]
_svy_newrule , `weight' `strata' `psu' `fpc'
mlopts mlopts rest, `options' `eform'
svyopts svymlopts diopts , `rest'
local diopts `diopts' `irr'
local subcond `s(subpop)'
/* Check estimation syntax. */
if `"`log'"' == "" {
local log nolog
local quietly quietly
}
if `"`score'"'!="" {
local n : word count `score'
if `n'==1 & substr("`score'",-1,1)=="*" {
local score = /*
*/ substr("`score'",1,length("`score'")-1)
local score `score'1 `score'2
local n
}
confirm new variable `score'
local nword : word count `score'
if `nword' != 2 {
di as err "score() must contain the names of " /*
*/ "two new variables"
exit 198
}
local scname1 : word 1 of `score'
local scname2 : word 2 of `score'
tempvar scvar1 scvar2
local scopt "score(`scvar1' `scvar2')"
}
if "`offset'"!="" & "`exposure'"!="" {
di as err "only one of offset() or exposure() can be specified"
exit 198
}
if "`constant'"!="" {
local nvar : word count `varlist'
if `nvar' == 1 {
di as err "independent variables required with " /*
*/ "noconstant option"
exit 102
}
}
/* Mark sample except for offset/exposure. */
marksample touse, zeroweight
markout `touse' `lnalpha'
/* Process offset/exposure. */
if "`exposure'"!="" {
capture assert `exposure' > 0 if `touse'
if _rc {
di as err "exposure() must be greater than zero"
exit 459
}
tempvar offset
qui gen double `offset' = ln(`exposure')
local offvar "ln(`exposure')"
}
if "`offset'"!="" {
markout `touse' `offset'
local offopt "offset(`offset')"
if "`offvar'"=="" {
local offvar "`offset'"
}
}
/* Count obs and check for negative values of `y'. */
gettoken y xvars : varlist
summarize `y' if `touse', meanonly
if r(N) == 0 {
error 2000
}
if r(N) == 1 {
error 2001
}
if r(min) < 0 {
di as err "`y' must be greater than or equal to zero"
exit 459
}
if r(min) == r(max) & r(min) == 0 {
di as err "`y' is zero for all observations"
exit 498
}
tempname mean
scalar `mean' = r(mean)
/* Check whether `y' is integer-valued. */
if "`display'"=="" {
capture assert `y' == int(`y') if `touse'
if _rc {
di as txt "note: you are responsible for " /*
*/ "interpretation of non-count dep. variable"
}
}
/* Remove collinearity. */
quietly svyset
local wtype `r(wtype)'
local wexp "`r(wexp)'"
_rmcoll `xvars' [`wtype'`wexp'] if `touse', `constant'
local xvars `r(varlist)'
/* Get initial values. */
if `"`from'"'=="" {
qui svypoisson `y' `xvars' if `touse', /*
*/ `offopt' `constant' iter(1)
tempname bp
mat `bp' = e(b)
tempname b0
mat `b0' = (0)
mat colnames `b0' = lnalpha:_cons
mat `bp' = (`bp',`b0')
local initopt "init(`bp')"
}
else local initopt `"init(`from')"'
/* Fit miss-specified model. */
local 0 , `diopts' `svymlopts'
syntax [, MEFF MEFT * ]
if "`meff'`meft'" != "" {
`quietly' di _n as txt "Computing misspecified " ///
as res "gnbreg" ///
as txt " model for meff/meft computation:"
if "`subcond'" != "" {
local mysubtouse (`touse' & `subcond' != 0)
}
else local mysubtouse `touse'
eret clear
`quietly' gnbreg `y' `xvars' if `mysubtouse', /*
*/ `constant' `mlopts' `offopt' lnalpha(`lnalpha')
tempname Vmeff
mat `Vmeff' = e(V)
}
/* Fit full model. */
ml model lf gnbre_lf /*
*/ (`y': `y'=`xvars', `constant' `offopt') /*
*/ (lnalpha: `lnalpha') /*
*/ if `touse', /*
*/ collinear /*
*/ missing /*
*/ max /*
*/ nooutput /*
*/ nopreserve /*
*/ `mlopts' /*
*/ svy /*
*/ `svymlopts' /*
*/ `scopt' /*
*/ `log' /*
*/ `initopt' /*
*/ search(off) /*
*/ title(Survey generalized negative binomial regression) /*
*/ crittype("log pseudolikelihood") /*
*/
if "`score'"!="" {
label var `scvar1' "Score index for x*b from nbreg"
rename `scvar1' `scname1'
label var `scvar2' "Score index for lnalpha from gnbreg"
rename `scvar2' `scname2'
eret local scorevars `scname1' `scname2'
}
else eret local scorevars
eret local offset "`offvar'"
eret local offset1 /* erase; set by -ml- */
eret local predict "gnbreg_p"
if "`Vmeff'" != "" {
_svy_mkmeff `Vmeff'
}
eret local cmd "svygnbreg"
/* Double save. */
global S_E_nobs = e(N)
global S_E_nstr = e(N_strata)
global S_E_npsu = e(N_psu)
global S_E_npop = e(N_pop)
global S_E_wgt `e(wtype)'
global S_E_exp "`e(wexp)'"
global S_E_str `e(strata)'
global S_E_psu `e(psu)'
global S_E_depv `e(depvar)'
global S_E_f = e(F)
global S_E_mdf = e(df_m)
global S_E_cmd `e(cmd)'
Display, `diopts'
end
program define Display
syntax [, Level(cilevel) * ]
ml display , level(`level') `options'
end
exit
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