spambaseevalop.hpp

非常好的进化算法EC 实现平台 可以实现多种算法 GA GP

/*
 *  Open BEAGLE
 *  Copyright (C) 2001-2005 by Christian Gagne and Marc Parizeau
 *
 *  This library is free software; you can redistribute it and/or
 *  modify it under the terms of the GNU Lesser General Public
 *  License as published by the Free Software Foundation; either
 *  version 2.1 of the License, or (at your option) any later version.
 *
 *  This library is distributed in the hope that it will be useful,
 *  but WITHOUT ANY WARRANTY; without even the implied warranty of
 *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 *  Lesser General Public License for more details.
 *
 *  You should have received a copy of the GNU Lesser General Public
 *  License along with this library; if not, write to the Free Software
 *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
 *
 *  Contact:
 *  Laboratoire de Vision et Systemes Numeriques
 *  Departement de genie electrique et de genie informatique
 *  Universite Laval, Quebec, Canada, G1K 7P4
 *  http://vision.gel.ulaval.ca
 *
 */

/*!
 *  \file   SpambaseEvalOp.hpp
 *  \brief  Definition of the type SpambaseEvalOp.
 *  \author Christian Gagne
 *  \author Marc Parizeau
 *  $Revision: 1.7 $
 *  $Date: 2005/10/04 09:32:56 $
 */

/*!
 *  \defgroup Spambase Spambase Example
 *  \brief SPAM e-mail database (spambase): Machine learning using strongly-typed GP
 *     with Open BEAGLE.
 *
 *  \par Objective
 *  Find a program the will successfully predict whether a given e-mail is spam
 *  or not from some extracted features.
 *
 *  \par Comments
 *  The evolved programs works on floating-point values AND Booleans values.
 *  The programs must return a Boolean value which must be true if e-mail is
 *  spam, and false otherwise. Don't expect too much from this program as
 *  it is quite basic and not oriented toward performance. It is there mainly
 *  to illustrate the use of strongly-typed GP with Open BEAGLE.
 *
 *  \par Terminal set
 *  - IN0, IN1, ...  up to IN56, the e-mail features.      [floating-point]
 *  - 0 and 1, two Boolean constants.                      [Boolean]
 *  - Ephemeral constants randomly generated in $[0,100]$  [floating-point]
 *
 *  \par Function set
 *  - AND               [Inputs: Booleans,        Output: Boolean]
 *  - OR                [Input:  Boolean,         Output: Boolean]
 *  - NOT               [Inputs: Booleans,        Output: Boolean]
 *  - +                 [Inputs: floating-points, Output: floating-point]
 *  - -                 [Inputs: floating-points, Output: floating-point]
 *  - *                 [Inputs: floating-points, Output: floating-point]
 *  - /                 [Inputs: floating-points, Output: floating-point]
 *  - <                 [Inputs: floating-points, Output: Booleans]
 *  - ==                [Inputs: floating-points, Output: Booleans]
 *  - if-then-else      [1st Input: Boolean, 2nd & 3rd Input: floating-points,
 *                       Output: floating-point]
 *
 *  \par Fitness cases
 *  A random sample of 400 e-mails over the database, re-chosen for
 *  each fitness evaluation.
 *
 *  \par Hits
 *  Number of correct outputs obtained over the 400 fitness cases.
 *
 *  \par Raw fitness
 *  Ignored (always 0).
 *
 *  \par Standardized fitness
 *  Rate of correct outputs over the fitness cases where
 *  the desired output was 0 (non-spam).
 *
 *  \par Adjusted fitness
 *  Rate of correct outputs over the fitness cases where
 *  the desired output was 1 (spam).
 *
 *  \par Normalized fitness
 *  Rate of correct outputs obtained over all the 400 fitness cases.
 *
 *  \par Stopping criteria
 *  When the best individual scores 400 hits or when the evolution reaches
 *  the maximum number of generations.
 *
 *  \par Reference
 *  Machine learning repository, http://www.ics.uci.edu/~mlearn/MLRepository.html
 *
 */
 
#ifndef SpambaseEvalOp_hpp
#define SpambaseEvalOp_hpp

#include "beagle/GP.hpp"
#include <string>
#include <vector>

#define Spambase_DataSize 4601
#define Spambase_TestSize 400


/*!
 *  \class SpambaseEvalOp SpambaseEvalOp.hpp "SpambaseEvalOp.hpp"
 *  \brief The individual evaluation class operator for the spambase problem.
 *  \ingroup Spambase
 */
class SpambaseEvalOp : public Beagle::GP::EvaluationOp {

public:

  //! SpambaseEvalOp allocator type.
  typedef Beagle::AllocatorT<SpambaseEvalOp,Beagle::GP::EvaluationOp::Alloc>
          Alloc;
  //!< SpambaseEvalOp handle type.
  typedef Beagle::PointerT<SpambaseEvalOp,Beagle::GP::EvaluationOp::Handle>
          Handle;
  //!< SpambaseEvalOp bag type.
  typedef Beagle::ContainerT<SpambaseEvalOp,Beagle::GP::EvaluationOp::Bag>
          Bag;

  explicit SpambaseEvalOp(Beagle::string inFilename="spambase.data");

  virtual void initialize(Beagle::System& ioSystem);
  virtual Beagle::Fitness::Handle evaluate(Beagle::GP::Individual& inIndividual,
                                           Beagle::GP::Context& ioContext);
  virtual void postInit(Beagle::System& ioSystem);
          void readData(Beagle::string inFilename, unsigned int inSizeData);

protected:
  Beagle::String::Handle                     mFilename;        //!< Filename containing the data.
  std::vector< std::vector<Beagle::Double> > mInputs;          //!< Spambase data inputs.
  std::vector<Beagle::Bool>                  mOutputs;         //!< Desired tags (1=spam,0=non-spam).
  std::vector<unsigned int>                  mShuffledTable;   //!< Shuffled index table of the data.
  Beagle::string                             mFilenameDefault; //!< Default filename used.

};

#endif // SpambaseEvalOp_hpp