index-all.html

Java方面的数值算法

<DD>Calculates the Manhattan distance as the sum of the absolute differences
 of their coordinates.
<DT><A HREF="./net/sf/javaml/distance/MaxProductSimilarity.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/MaxProductSimilarity.html" title="class in net.sf.javaml.distance">MaxProductSimilarity</A>
<DD>XXX doc
<DT><A HREF="./net/sf/javaml/distance/NormalizedEuclideanDistance.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/NormalizedEuclideanDistance.html" title="class in net.sf.javaml.distance">NormalizedEuclideanDistance</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/distance/NormalizedEuclideanSimilarity.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/NormalizedEuclideanSimilarity.html" title="class in net.sf.javaml.distance">NormalizedEuclideanSimilarity</A>
<DD>XXX DOC
<DT><A HREF="./net/sf/javaml/distance/NormDistance.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/NormDistance.html" title="class in net.sf.javaml.distance">NormDistance</A>
<DD>XXX add doc
<DT><A HREF="./net/sf/javaml/distance/PearsonCorrelationCoefficient.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/PearsonCorrelationCoefficient.html" title="class in net.sf.javaml.distance">PearsonCorrelationCoefficient</A>
<DD>XXX DOC
<DT><A HREF="./net/sf/javaml/distance/PolynomialKernel.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/PolynomialKernel.html" title="class in net.sf.javaml.distance">PolynomialKernel</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/distance/RBFKernel.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/RBFKernel.html" title="class in net.sf.javaml.distance">RBFKernel</A>
<DD>XXX DOC
<DT><A HREF="./net/sf/javaml/distance/RBFKernelDistance.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/RBFKernelDistance.html" title="class in net.sf.javaml.distance">RBFKernelDistance</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/tools/bioinformatics/BlastResult.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.tools.bioinformatics.<A HREF="./net/sf/javaml/tools/bioinformatics/BlastResult.html" title="class in net.sf.javaml.tools.bioinformatics">BlastResult</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/tools/bioinformatics/BlastSimilarity.html#calculateDistance(net.sf.javaml.core.Instance, net.sf.javaml.core.Instance)"><B>calculateDistance(Instance, Instance)</B></A> - 
Method in class net.sf.javaml.tools.bioinformatics.<A HREF="./net/sf/javaml/tools/bioinformatics/BlastSimilarity.html" title="class in net.sf.javaml.tools.bioinformatics">BlastSimilarity</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/clustering/CAST.html" title="class in net.sf.javaml.clustering"><B>CAST</B></A> - Class in <A HREF="./net/sf/javaml/clustering/package-summary.html">net.sf.javaml.clustering</A><DD>&nbsp;<DT><A HREF="./net/sf/javaml/clustering/CAST.html#CAST(int)"><B>CAST(int)</B></A> - 
Constructor for class net.sf.javaml.clustering.<A HREF="./net/sf/javaml/clustering/CAST.html" title="class in net.sf.javaml.clustering">CAST</A>
<DD>XXX add docu
<DT><A HREF="./net/sf/javaml/clustering/mcl/Vectors.html#cast(double[])"><B>cast(double[])</B></A> - 
Static method in class net.sf.javaml.clustering.mcl.<A HREF="./net/sf/javaml/clustering/mcl/Vectors.html" title="class in net.sf.javaml.clustering.mcl">Vectors</A>
<DD>cast a double[] to an int[]
<DT><A HREF="./net/sf/javaml/clustering/mcl/Vectors.html#cast(int[])"><B>cast(int[])</B></A> - 
Static method in class net.sf.javaml.clustering.mcl.<A HREF="./net/sf/javaml/clustering/mcl/Vectors.html" title="class in net.sf.javaml.clustering.mcl">Vectors</A>
<DD>cast a double[] to an int[]
<DT><A HREF="./net/sf/javaml/core/KDTree.html#centerInstances(net.sf.javaml.core.Instance[], int[], double)"><B>centerInstances(Instance[], int[], double)</B></A> - 
Method in class net.sf.javaml.core.<A HREF="./net/sf/javaml/core/KDTree.html" title="class in net.sf.javaml.core">KDTree</A>
<DD>Assigns instances to centers using KDTree.
<DT><A HREF="./net/sf/javaml/utils/ArrayOperations.html#changeLength(double, double[])"><B>changeLength(double, double[])</B></A> - 
Static method in class net.sf.javaml.utils.<A HREF="./net/sf/javaml/utils/ArrayOperations.html" title="class in net.sf.javaml.utils">ArrayOperations</A>
<DD>&nbsp;
<DT><A HREF="./nz/ac/waikato/cs/weka/Utils.html#checkForRemainingOptions(java.lang.String[])"><B>checkForRemainingOptions(String[])</B></A> - 
Static method in class nz.ac.waikato.cs.weka.<A HREF="./nz/ac/waikato/cs/weka/Utils.html" title="class in nz.ac.waikato.cs.weka">Utils</A>
<DD>Checks if the given array contains any non-empty options.
<DT><A HREF="./gov/nist/math/jama/Matrix.html#chol()"><B>chol()</B></A> - 
Method in class gov.nist.math.jama.<A HREF="./gov/nist/math/jama/Matrix.html" title="class in gov.nist.math.jama">Matrix</A>
<DD>Cholesky Decomposition
<DT><A HREF="./gov/nist/math/jama/CholeskyDecomposition.html" title="class in gov.nist.math.jama"><B>CholeskyDecomposition</B></A> - Class in <A HREF="./gov/nist/math/jama/package-summary.html">gov.nist.math.jama</A><DD>Cholesky Decomposition.<DT><A HREF="./gov/nist/math/jama/CholeskyDecomposition.html#CholeskyDecomposition(gov.nist.math.jama.Matrix)"><B>CholeskyDecomposition(Matrix)</B></A> - 
Constructor for class gov.nist.math.jama.<A HREF="./gov/nist/math/jama/CholeskyDecomposition.html" title="class in gov.nist.math.jama">CholeskyDecomposition</A>
<DD>Cholesky algorithm for symmetric and positive definite matrix.
<DT><A HREF="./net/sf/javaml/clustering/mcl/Vectors.html#chooseElements(double[][], int[], int[])"><B>chooseElements(double[][], int[], int[])</B></A> - 
Static method in class net.sf.javaml.clustering.mcl.<A HREF="./net/sf/javaml/clustering/mcl/Vectors.html" title="class in net.sf.javaml.clustering.mcl">Vectors</A>
<DD>Create a matrix that contains the rows and columns of the argument matrix
 in the order given by rows and cols
<DT><A HREF="./net/sf/javaml/clustering/mcl/Vectors.html#chooseElements(double[], int[])"><B>chooseElements(double[], int[])</B></A> - 
Static method in class net.sf.javaml.clustering.mcl.<A HREF="./net/sf/javaml/clustering/mcl/Vectors.html" title="class in net.sf.javaml.clustering.mcl">Vectors</A>
<DD>Create vector that contains the elements of the argument in the order as
 given by keep
<DT><A HREF="./net/sf/javaml/clustering/mcl/Vectors.html#chooseElements(int[][], int[], int[])"><B>chooseElements(int[][], int[], int[])</B></A> - 
Static method in class net.sf.javaml.clustering.mcl.<A HREF="./net/sf/javaml/clustering/mcl/Vectors.html" title="class in net.sf.javaml.clustering.mcl">Vectors</A>
<DD>Create a matrix that contains the rows and columns of the argument matrix
 in the order given by rows and cols
<DT><A HREF="./net/sf/javaml/clustering/mcl/Vectors.html#chooseElements(int[], int[])"><B>chooseElements(int[], int[])</B></A> - 
Static method in class net.sf.javaml.clustering.mcl.<A HREF="./net/sf/javaml/clustering/mcl/Vectors.html" title="class in net.sf.javaml.clustering.mcl">Vectors</A>
<DD>Create vector that contains the elements of the argument in the order as
 given by keep
<DT><A HREF="./net/sf/javaml/clustering/evaluation/CIndex.html" title="class in net.sf.javaml.clustering.evaluation"><B>CIndex</B></A> - Class in <A HREF="./net/sf/javaml/clustering/evaluation/package-summary.html">net.sf.javaml.clustering.evaluation</A><DD>TODO uitleg<DT><A HREF="./net/sf/javaml/clustering/evaluation/CIndex.html#CIndex(net.sf.javaml.distance.DistanceMeasure)"><B>CIndex(DistanceMeasure)</B></A> - 
Constructor for class net.sf.javaml.clustering.evaluation.<A HREF="./net/sf/javaml/clustering/evaluation/CIndex.html" title="class in net.sf.javaml.clustering.evaluation">CIndex</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/classification/Classifier.html" title="interface in net.sf.javaml.classification"><B>Classifier</B></A> - Interface in <A HREF="./net/sf/javaml/classification/package-summary.html">net.sf.javaml.classification</A><DD>&nbsp;<DT><A HREF="./net/sf/javaml/classification/Classifier.html#classifyInstance(net.sf.javaml.core.Instance)"><B>classifyInstance(Instance)</B></A> - 
Method in interface net.sf.javaml.classification.<A HREF="./net/sf/javaml/classification/Classifier.html" title="interface in net.sf.javaml.classification">Classifier</A>
<DD>Classify the instance according to this classifier.
<DT><A HREF="./net/sf/javaml/classification/Logistic.html#classifyInstance(net.sf.javaml.core.Instance)"><B>classifyInstance(Instance)</B></A> - 
Method in class net.sf.javaml.classification.<A HREF="./net/sf/javaml/classification/Logistic.html" title="class in net.sf.javaml.classification">Logistic</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/classification/svm/BinaryLinearSMO.html#classifyInstance(net.sf.javaml.core.Instance)"><B>classifyInstance(Instance)</B></A> - 
Method in class net.sf.javaml.classification.svm.<A HREF="./net/sf/javaml/classification/svm/BinaryLinearSMO.html" title="class in net.sf.javaml.classification.svm">BinaryLinearSMO</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/classification/svm/BinarySMO.html#classifyInstance(net.sf.javaml.core.Instance)"><B>classifyInstance(Instance)</B></A> - 
Method in class net.sf.javaml.classification.svm.<A HREF="./net/sf/javaml/classification/svm/BinarySMO.html" title="class in net.sf.javaml.classification.svm">BinarySMO</A>
<DD>&nbsp;
<DT><A HREF="./gov/nist/math/jama/Matrix.html#clone()"><B>clone()</B></A> - 
Method in class gov.nist.math.jama.<A HREF="./gov/nist/math/jama/Matrix.html" title="class in gov.nist.math.jama">Matrix</A>
<DD>Clone the Matrix object.
<DT><A HREF="./net/sf/javaml/clustering/Clusterer.html" title="interface in net.sf.javaml.clustering"><B>Clusterer</B></A> - Interface in <A HREF="./net/sf/javaml/clustering/package-summary.html">net.sf.javaml.clustering</A><DD>A common interface for all clustering techniques.<DT><A HREF="./net/sf/javaml/clustering/evaluation/ClusterEvaluation.html" title="interface in net.sf.javaml.clustering.evaluation"><B>ClusterEvaluation</B></A> - Interface in <A HREF="./net/sf/javaml/clustering/evaluation/package-summary.html">net.sf.javaml.clustering.evaluation</A><DD>This interface provides a frame for all measure that can be used to evaluate
 the quality of a clusterer.<DT><A HREF="./net/sf/javaml/clustering/Cobweb.html" title="class in net.sf.javaml.clustering"><B>Cobweb</B></A> - Class in <A HREF="./net/sf/javaml/clustering/package-summary.html">net.sf.javaml.clustering</A><DD>Class implementing the Cobweb and Classit clustering algorithms.<DT><A HREF="./net/sf/javaml/clustering/Cobweb.html#Cobweb()"><B>Cobweb()</B></A> - 
Constructor for class net.sf.javaml.clustering.<A HREF="./net/sf/javaml/clustering/Cobweb.html" title="class in net.sf.javaml.clustering">Cobweb</A>
<DD>default constructor
<DT><A HREF="./net/sf/javaml/clustering/Cobweb.html#Cobweb(double, double)"><B>Cobweb(double, double)</B></A> - 
Constructor for class net.sf.javaml.clustering.<A HREF="./net/sf/javaml/clustering/Cobweb.html" title="class in net.sf.javaml.clustering">Cobweb</A>
<DD>XXX DOC
<DT><A HREF="./net/sf/javaml/clustering/mcl/Vectors.html#colwidth"><B>colwidth</B></A> - 
Static variable in class net.sf.javaml.clustering.mcl.<A HREF="./net/sf/javaml/clustering/mcl/Vectors.html" title="class in net.sf.javaml.clustering.mcl">Vectors</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/core/KDTree.html#combSort11(double[], int[])"><B>combSort11(double[], int[])</B></A> - 
Static method in class net.sf.javaml.core.<A HREF="./net/sf/javaml/core/KDTree.html" title="class in net.sf.javaml.core">KDTree</A>
<DD>-------------------------------------------------------------------------------- *
 variables for nearest neighbour search
 --------------------------------------------------------------------------------
<DT><A HREF="./net/sf/javaml/distance/AbstractDistance.html#compare(double, double)"><B>compare(double, double)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/AbstractDistance.html" title="class in net.sf.javaml.distance">AbstractDistance</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/distance/AbstractSimilarity.html#compare(double, double)"><B>compare(double, double)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/AbstractSimilarity.html" title="class in net.sf.javaml.distance">AbstractSimilarity</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/distance/DistanceMeasure.html#compare(double, double)"><B>compare(double, double)</B></A> - 
Method in interface net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/DistanceMeasure.html" title="interface in net.sf.javaml.distance">DistanceMeasure</A>
<DD>Returns whether the first distance/similarity is better than the second distance/similarity.
<DT><A HREF="./net/sf/javaml/distance/PolynomialKernel.html#compare(double, double)"><B>compare(double, double)</B></A> - 
Method in class net.sf.javaml.distance.<A HREF="./net/sf/javaml/distance/PolynomialKernel.html" title="class in net.sf.javaml.distance">PolynomialKernel</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/clustering/evaluation/AICScore.html#compareScore(double, double)"><B>compareScore(double, double)</B></A> - 
Method in class net.sf.javaml.clustering.evaluation.<A HREF="./net/sf/javaml/clustering/evaluation/AICScore.html" title="class in net.sf.javaml.clustering.evaluation">AICScore</A>
<DD>&nbsp;
<DT><A HREF="./net/sf/javaml/clustering/evaluation/BICScore.html#compareScore(double, double)"><B>compareScore(double, double)</B></A> -