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📄 r12ia_memgrp.cc

📁 大型并行量子化学软件;支持密度泛函(DFT)。可以进行各种量子化学计算。支持CHARMM并行计算。非常具有应用价值。
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//// r12ia_memgrp.cc//// Copyright (C) 2002 Edward Valeev//// Author: Edward Valeev <edward.valeev@chemistry.gatech.edu>// Maintainer: EV//// This file is part of the SC Toolkit.//// The SC Toolkit is free software; you can redistribute it and/or modify// it under the terms of the GNU Library General Public License as published by// the Free Software Foundation; either version 2, or (at your option)// any later version.//// The SC Toolkit is distributed in the hope that it will be useful,// but WITHOUT ANY WARRANTY; without even the implied warranty of// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the// GNU Library General Public License for more details.//// You should have received a copy of the GNU Library General Public License// along with the SC Toolkit; see the file COPYING.LIB.  If not, write to// the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA.//// The U.S. Government is granted a limited license as per AL 91-7.//#ifdef __GNUC__#pragma implementation#endif#include <stdexcept>#include <stdlib.h>#include <util/misc/formio.h>#include <util/misc/exenv.h>#include <chemistry/qc/mbptr12/r12ia_memgrp.h>using namespace std;using namespace sc;///////////////////////////////////////////////////////////////R12IntsAcc_MemoryGrp::R12IntsAcc_MemoryGrp(Ref<MemoryGrp>& mem, int num_te_types, int nbasis1, int nbasis2, int nocc, int nfzc) :  R12IntsAcc(num_te_types, nbasis1, nbasis2, nocc, nfzc){  mem_ = mem;  nproc_ = mem->n();    // Now do some extra work to figure layout of data in MemoryGrp  // Compute global offsets to each processor's data  int i,j,ij;  pairblk_ = new struct PairBlkInfo[nocc_act_*nocc_act_];  for(i=0,ij=0;i<nocc_act_;i++)    for(j=0;j<nocc_act_;j++,ij++) {      pairblk_[ij].ints_[eri] = NULL;      pairblk_[ij].ints_[r12] = NULL;      pairblk_[ij].ints_[r12t1] = NULL;      pairblk_[ij].ints_[r12t2] = NULL;      pairblk_[ij].refcount_[eri] = 0;      pairblk_[ij].refcount_[r12] = 0;      pairblk_[ij].refcount_[r12t1] = 0;      pairblk_[ij].refcount_[r12t2] = 0;      int local_ij_index = ij_index(i,j)/nproc_;      pairblk_[ij].offset_ = (distsize_t)local_ij_index*blocksize_ + mem_->offset(ij_proc(i,j));    }}R12IntsAcc_MemoryGrp::~R12IntsAcc_MemoryGrp(){  for(int i=0;i<nocc_act_;i++)    for(int j=0;j<nocc_act_;j++)      if (!is_local(i,j)) {	int ij = ij_index(i,j);	for(int oper_type=0; oper_type<num_te_types(); oper_type++)	  if (pairblk_[ij].ints_[oper_type] != NULL) {	    ExEnv::outn() << indent << mem_->me() << ": i = " << i << " j = " << j << " oper_type = " << oper_type << endl;	    throw std::runtime_error("Logic error: R12IntsAcc_MemoryGrp::~ : some nonlocal blocks have not been released!");	  }      }  delete[] pairblk_;}voidR12IntsAcc_MemoryGrp::store_memorygrp(Ref<MemoryGrp>& mem, int ni){  if (committed_) {    ExEnv::out0() << "R12IntsAcc_MemoryGrp::store_memorygrp(mem,ni) called after all data has been committed" << endl;    abort();  }  // mem must be the same as mem_  else if (mem_ != mem) {    ExEnv::out0() << "R12IntsAcc_MemoryGrp::store_memorygrp(mem,ni) called with invalid argument:" << endl <<      "mem != R12IntsAcc_MemoryGrp::mem_" << endl;    abort();  }  else if (ni != nocc_act_) {    ExEnv::out0() << "R12IntsAcc_MemoryGrp::store_memorygrp(mem,ni) called with invalid argument:" << endl <<      "ni != R12IntsAcc_MemoryGrp::nocc_act_" << endl;    abort();  }  else    for (int i=0; i<nocc_act_; i++)      for (int j=0; j<nocc_act_; j++)	if (is_local(i,j)) {	  int local_ij_index = ij_index(i,j)/nproc_;	  double *integral_ij_offset = (double *)mem_->localdata() + nbasis__2_*num_te_types()*local_ij_index;	  store_pair_block(i,j,integral_ij_offset);	}}voidR12IntsAcc_MemoryGrp::store_pair_block(int i, int j, double *ints){  // For now store blocks local to this node ONLY  if (is_local(i,j)) {    int ij = ij_index(i,j);    pairblk_[ij].ints_[eri] = ints;    pairblk_[ij].ints_[r12] = ints + nbasis__2_;    pairblk_[ij].ints_[r12t1] = ints + 2*nbasis__2_;    pairblk_[ij].ints_[r12t2] = ints + 3*nbasis__2_;  }}voidR12IntsAcc_MemoryGrp::deactivate(){  mem_->sync();  mem_->set_localsize(0);}    double *R12IntsAcc_MemoryGrp::retrieve_pair_block(int i, int j, tbint_type oper_type){  int ij = ij_index(i,j);  struct PairBlkInfo *pb = &pairblk_[ij];  if (!is_local(i,j) && pb->ints_[oper_type] == 0) {    pb->ints_[oper_type] = (double *) mem_->obtain_readonly(pb->offset_ + (distsize_t)oper_type*blksize_, blksize_);  }  pb->refcount_[oper_type] += 1;  return pb->ints_[oper_type];}voidR12IntsAcc_MemoryGrp::release_pair_block(int i, int j, tbint_type oper_type){  int ij = ij_index(i,j);  struct PairBlkInfo *pb = &pairblk_[ij];  if (pb->refcount_[oper_type] <= 0) {    ExEnv::outn() << indent << mem_->me() << ":refcount=0: i = " << i << " j = " << j << " tbint_type = " << oper_type << endl;    throw std::runtime_error("Logic error: R12IntsAcc_MemoryGrp::release_pair_block: refcount is already zero!");  }  if (!is_local(i,j) && pb->ints_[oper_type] != NULL && pb->refcount_[oper_type] == 1) {    mem_->release_readonly(pb->ints_[oper_type],pb->offset_+ oper_type*blksize_,blksize_);    pb->ints_[oper_type] = NULL;  }  pb->refcount_[oper_type] -= 1;}// Local Variables:// mode: c++// c-file-style: "CLJ"// End:

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