pso_output.txt

粒子群算法与遗传算法用于优化的问题求解,可以解决一些

uccug*g*ugucuauggcgguauggaaccac*ucug*accccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaacca*aucc*aucccgaacuuggugguuaaa
aaucc*cc*gcccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaag*gcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*ca*uccgccaggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3437.53

最佳染色体为:
*cc*u*agugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u*u*u*gguggcgauagc*gaagag*gucacacccguucuc*augccgaacacggaaguuaag
ucugguggc*gaua**gc*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg**c*auu*ga*ggucacaccugu*ucccauaccgaacacagaaguuaag
ugccu*ggcggccguagc*gcggugg*ucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccaguguc*ua*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag
uguucuuugacgaguaguagcauugg*aa*caccugauccc*aucccgaacucagaggugaaa
uggccugguggucauugcgggcuc*ga*aacacccgau*cccaucccgaacucggccgugaaa
uccug*g*ugucuauggcgguauggaaccac*ucug*accccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaacca*aucc*aucccgaacuuggugguuaaa
aaucc*cc*gcccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaag*gcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*ca*uccgccaggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3437.53

出现的周期为:19  出现在该周期的代数为:18
出现最佳的时间为:65520毫秒.
程序运行时间为:66900毫秒.
遗传算法结束,生成最佳染色体。。继续pso算法。。
第0次pso第39代最好的染色体为：
染色体为:
c*cu**agugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u**uu*gguggcgauagc*gaagag*gucacacccguucuc*augccgaacacggaaguuaag
ucuggugg*cgau*a*gc*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg**c*auug*a*ggucacaccugu*ucccauaccgaacacagaaguuaag
ugccu*ggcggccguagc*gcggugg*ucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccaguguc*ua*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag
uguucuuugacgaguaguagcauugg*a*acaccugauccca*ucccgaacucagaggugaaa
uggccugguggucauugcgggcuc*ga*aacacccgau*cccaucccgaacucggccgugaaa
uccug*g*ugucuauggcgguauggaaccac*ucuga*ccccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaa*ucc*aucccgaacuuggugguuaaa
aaucc*cc*gcccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaa*ggcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*cau*ccgccaggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3419.19

第0次pso第67代最好的染色体为：
染色体为:
c*cu*ag*ugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u**uu*gguggcgauagc*gaagag*gucacacccguucuc*augccgaacacggaaguuaag
ucuggugg*c*gaua*gc*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg**ca*uug*a*ggucacaccugu*ucccauaccgaacacagaaguuaag
ugccu*ggcggccguagc*gcggu*ggucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccaguguc*ua*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag
uguucuuugacgaguaguagcauugg**aacaccugauccc*aucccgaacucagaggugaaa
uggccugguggucauugcgggcucga**aacacccgau*cccaucccgaacucggccgugaaa
uccug*g*ugucuauggcgguauggaaccac*ucuga*ccccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaau*cc*aucccgaacuuggugguuaaa
aaucc*cc*gcccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaa*ggcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*cau*ccgccaggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3417.25

第0次pso第70代最好的染色体为：
染色体为:
c*cu**agugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u*u*u*gguggcgauagc*gaaga*ggucacacccguucuc*augccgaacacggaaguuaag
ucuggugg**cgaua*gc*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg**ca*uug*a*ggucacaccugu*ucccauaccgaacacagaaguuaag
ugccu*ggcggccguagc*gcgg*uggucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccagugucu*a*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag
uguucuuugacgaguaguagcauugg**aacaccugauccc*aucccgaacucagaggugaaa
uggccugguggucauugcgggcucga*a*acacccgau*cccaucccgaacucggccgugaaa
uccug*g*ugucuauggcgguauggaaccac*ucugac*cccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaau*cc*aucccgaacuuggugguuaaa
aaucc*ccgc*ccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaa*ggcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*caucc*gccaggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3414.03

第0次pso第72代最好的染色体为：
染色体为:
c*c*u*agugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u*u*u*gguggcgauagc*gaaga*ggucacacccguucuc*augccgaacacggaaguuaag
ucuggugg**cgaua*gc*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg**ca*uug*a*ggucacaccugu*ucccauaccgaacacagaaguuaag
ugccu*ggcggccguagc*gcggu*ggucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccagugucu*a*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag
uguucuuugacgaguaguagcau*ugg*aacaccugauccc*aucccgaacucagaggugaaa
uggccugguggucauugcgggcuc*ga*aacacccgau*cccaucccgaacucggccgugaaa
uccug*g*ugucuauggcgguauggaaccac*ucugac*cccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaau*cc*aucccgaacuuggugguuaaa
aaucc*ccg*cccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaa*ggcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*caucc*gccaggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3385.97

第0次pso第86代最好的染色体为：
染色体为:
c*c*u*agugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u*u*u*gguggcgauagc*gaaga*ggucacacccguucuc*augccgaacacggaaguuaag
ucuggugg**cgaua*gc*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg**ca*uug*a*ggucacaccugu*ucccauaccgaacacagaaguuaag
ugccu*ggcggccguagc*gcggu*ggucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccagugu*cua*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag
uguucuuugacgaguaguagcau*ugg*aacaccugauccc*aucccgaacucagaggugaaa
uggccugguggucauugcgggcuc*ga*aacacccgau*cccaucccgaacucggccgugaaa
uccug*g*ugucuauggcgguauggaaccac*ucugac*cccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaau*cc*aucccgaacuuggugguuaaa
aaucc*ccg*cccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaa*ggcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*cauc*cgccaggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3376.3

第0次pso第90代最好的染色体为：
染色体为:
c*c*u*agugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u*u*u*gguggcgauagc*gaaga*ggucacacccguucuc*augccgaacacggaaguuaag
ucuggugg*cgaua**gc*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg***cauug*a*ggucacaccugu*ucccauaccgaacacagaaguuaag
ugc*cuggcggccguagc*gcggu*ggucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccagugu*cua*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag
uguucuuugacgaguaguagcauugg*a*acaccugauccc*aucccgaacucagaggugaaa
uggccugguggucauugcgggcuc*ga*aacacccgau*cccaucccgaacucggccgugaaa
uccug*g*ugucuauggcgguauggaaccac*ucugac*cccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaau*c*caucccgaacuuggugguuaaa
aaucc*cc*gcccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaa*ggcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*cauccgcc*aggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3368.39

第0次pso第94代最好的染色体为：
染色体为:
c*c*u*agugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u*u*u*gguggcgauagc*gaaga*ggucacacccguucuc*augccgaacacggaaguuaag
ucuggugg*cgaua**gc*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg***cauug*a*ggucacaccugu*ucccauaccgaacacagaaguuaag
ugcc*uggcggccguagc*gcggu*ggucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccagugu*cua*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag
uguucuuugacgaguaguagcauugg*a*acaccugauccc*aucccgaacucagaggugaaa
uggccugguggucauugcgggcuc*ga*aacacccgau*cccaucccgaacucggccgugaaa
uccug*g*ugucuauggcgguauggaaccac*ucugac*cccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaau*c*caucccgaacuuggugguuaaa
aaucc*cc*gcccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaa*ggcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*cauccgc*caggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3367.85

第0次pso第96代最好的染色体为：
染色体为:
c*c*u*agugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u*u*u*gguggcgauagc*gaaga*ggucacacccguucuc*augccgaacacggaaguuaag
ucuggugg**cgaua*gc*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg**ca*uug*a*ggucacaccugu*ucccauaccgaacacagaaguuaag
u*gccuggcggccguagc*gcggu*ggucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccagugu*cua*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag
uguucuuugacgaguaguagcauu*gg*aacaccugauccc*aucccgaacucagaggugaaa
uggccugguggucauugcgggcuc*ga*aacacccgau*cccaucccgaacucggccgugaaa
uccug*g*ugucuauggcgguauggaaccac*ucugac*cccaucccgaacucaguugugaaa
uauucugguguccuag*gcguaga*ggaaccacacca*auccaucccgaacuuggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaau*cc*aucccgaacuuggugguuaaa
aaucc*ccg*cccuuagcggcg*u*ggaac*acccguuccc*auuccgaacacggaagugaaa
u*uaa*ggcggccauagcggug*ggg*uuacucccgua*cccaucccgaacacggaagauaag
guuca*cau*ccgccaggacgcggcgauuacacccgguauccagcccgaacccggaagcgaaa
适应度为：3360.34

第0次pso第101代最好的染色体为：
染色体为:
c*c*u*agugacaauagcg*gagaggaaac*acccg*uucccaucccgaacacggaaguuaag
ccuag*ug*gu*gauagcggaggg*gaa*acacccguu*cccaucccgaacacggaaguuaag
u*uu**gguggcgauagc*gaagagguca*cacccguu*cccauaccgaacacggaaguuaag
u*u*u*gguggcgauagc*gaaga*ggucacacccguucuc*augccgaacacggaaguuaag
ucuggugg*cgaua*g*c*gaagagguc*acacccg*uucccauaccgaacacggaaguuaag
uguugugaugaugg***cauug*a*ggucacaccugu*ucccauaccgaacacagaaguuaag
u*gccuggcggccguagc*gcggu*ggucccaccug*accccaugccgaacucagaagugaaa
u*gucuggcggccauagcgc*agu*ggucccaccugauccc*augccgaacucagaagugaaa
ugcuu*ggcgaccauagcguuaug*gaccc*accugaucccu*ugccgaacucaguagugaaa
guuuc*gguggucauagc*gug*agggaaacgcccggu*uacauuccgaacccggaagcuaag
u*ccagugu*cua*u*gacuuaga*gguaacacucc*uucccauuccgaacaggcagguuaag