pso_output.txt

粒子群算法与遗传算法用于优化的问题求解,可以解决一些

u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaac*ucaguugugaaa
uauucugguguccuaggcgua*gaggaaccacac*caauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucca*ucccgaacuu*ggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaac*acggaagugaaa
u*uaaggcgg*ccauagcggu*gggguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3534.96

最佳染色体为:
*ccu*agugac*aauagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*ugg*ugauagcggaggggaaa*caccc*guucccaucccgaacac*ggaaguuaag
u*uu*gguggc*gauagcgaagagguca*ca*cccguucccauaccgaacacggaa*guuaag
u*uu*gguggcg*auagcgaagaggucac*accc*guucucaugccgaacac*ggaaguuaag
uc*u*gguggc*gauagcgaaga*ggucacac*ccguucccauaccgaacacg*gaaguuaag
uguugugaugauggca*u*u*gagguca*caccu*guucccauaccgaaca*cagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggc*gaccauagcguuauggac*ccaccugauc*ccuugccgaacu*caguagugaaa
guuucggu*ggucauagcgu*gagggaaacgcccgguuac*auuccgaaccc*ggaagcuaag
ucca*gugucuaugacuuagagguaaca*c**ucc*uucccauuccgaacag*gcagguuaag
uguucuuugacgaguaguagcauuggaa*caccu*gaucccaucccgaacu*cagaggugaaa
uggccugguggucauugcgggcucgaaa*caccc*gaucccaucccgaacucggcc*gugaaa
u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaac*ucaguugugaaa
uauucugguguccuaggcgua*gaggaaccacac*caauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucca*ucccgaacuu*ggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaac*acggaagugaaa
u*uaaggcgg*ccauagcggu*gggguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3534.96

出现的周期为:15  出现在该周期的代数为:64
出现最佳的时间为:68330毫秒.
程序运行时间为:75580毫秒.
遗传算法结束,生成最佳染色体。。继续pso算法。。
第0次pso第71代最好的染色体为：
染色体为:
*ccu*agugac*aauagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*ugg*ugauagcggaggggaaa*caccc*guucccaucccgaacac*ggaaguuaag
u*uu*gguggc*gauagcgaagagguca*ca*cccguucccauaccgaaca*cggaaguuaag
u*uu*gguggc*gauagcgaagagguc*acaccc*guucucaugccgaacac*ggaaguuaag
uc*ug*guggc*gauagcgaaga*ggucacac*ccguucccauaccgaacacg*gaaguuaag
uguugugaugauggca*u*u*gagguca*caccu*guucccauaccgaaca*cagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggc*gaccauagcguuauggac*ccaccuga*ucccuugccgaacu*caguagugaaa
guuucggu*ggucauagcgu*gagggaaacgcccgguuaca*uuccgaacc*cggaagcuaag
ucca*gugucuaugacuuagagguaaca*c**ucc*uucccauuccgaacag*gcagguuaag
uguucuuugacgaguaguagcauuggaa*caccu*gaucccaucccgaacu*cagaggugaaa
uggccugguggucauugcgggcucgaaa*caccc*gaucccaucccgaacucggcc*gugaaa
u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaac*ucaguugugaaa
uauucugguguccuaggcgua*gaggaa*ccacaccaauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucca*ucccgaacu*uggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaaca*cggaagugaaa
u*uaaggcgg*ccauagcggu*gggguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3523.64

第0次pso第78代最好的染色体为：
染色体为:
*ccu*agugaca*auagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*uggu*gauagcggaggggaaa*caccc*guucccaucccgaacac*ggaaguuaag
u*uu*gguggc*gauagcgaagagguca*cac*ccguucccauaccgaacacg*gaaguuaag
u*uu*gguggcg*auagcgaagaggucac*accc*guucucaugccgaacac*ggaaguuaag
uc*ug*guggc*gauagcgaaga*ggucacac*ccguucccauaccgaaca*cggaaguuaag
uguugugaugauggca*u*u*gagguc*acaccu*guucccauaccgaaca*cagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggc*gaccauagcguuauggac*ccaccu*gaucccuugccgaacu*caguagugaaa
guuucggu*ggucauagcg*ugagggaaacgcccgguuac*auuccgaacc*cggaagcuaag
ucca*gugucuaugacuuagagguaac*ac*u*cc*uucccauuccgaacaggc*agguuaag
uguucuuugacgaguaguagcauuggaa*caccu*gaucccaucccgaacu*cagaggugaaa
uggccugguggucauugcgggcucgaaa*caccc*gaucccaucccgaacucggc*cgugaaa
u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaacu*caguugugaaa
uauucugguguccuaggcgua*gaggaaccac*accaauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucca*ucccgaacu*uggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaaca*cggaagugaaa
u*uaaggcgg*ccauagcggu*gggguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3509.47

第0次pso第82代最好的染色体为：
染色体为:
cc*u*agugac*aauagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*ugg*ugauagcggaggggaaa*caccc*guucccaucccgaacacg*gaaguuaag
u*uu*gguggc*gauagcgaagagguca*cac*ccguucccauaccgaaca*cggaaguuaag
u*uu*gguggcga*uagcgaagagguca*caccc*guucucaugccgaacac*ggaaguuaag
uc*ug*guggc*gauagcgaaga*ggucacaccc*guucccauaccgaacac*ggaaguuaag
uguugugaugauggca*u*u*gagguca*caccu*guucccauaccgaa*cacagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggcgac*cauagcguuauggac*ccaccu*gaucccuugccgaacu*caguagugaaa
guuucggu*ggucauagcg*ugagggaaacgcccgguua*cauuccgaacc*cggaagcuaag
ucca*gugucuaugacuuagagguaa*cac*uc*c*uucccauuccgaacaggc*agguuaag
uguucuuugacgaguaguagcauuggaa*caccu*gaucccaucccgaacu*cagaggugaaa
uggccugguggucauugcgggcucgaaa*caccc*gaucccaucccgaacucggcc*gugaaa
u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaacuca*guugugaaa
uauucugguguccuaggcgua*gaggaaccacacc*aauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucc*aucccgaacu*uggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaaca*cggaagugaaa
u*uaaggcgg*ccauagcggugg*gguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3488.86

第0次pso第105代最好的染色体为：
染色体为:
c*cu*agugac*aauagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*ugg*ugauagcggaggggaaa*caccc*guucccaucccgaacac*ggaaguuaag
u*uu*gguggc*gauagcgaagagguca*cac*ccguucccauaccgaacac*ggaaguuaag
u*uu*ggugg*cgauagcgaagagguca*caccc*guucucaugccgaacac*ggaaguuaag
uc*ug*guggc*gauagcgaaga*ggucacacccg*uucccauaccgaaca*cggaaguuaag
uguugugaugauggcau**ug*agguca*caccu*guucccauaccgaac*acagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggcgac*cauagcguuauggac*ccaccu*gaucccuugccgaacu*caguagugaaa
guuucggu*ggucauagcg*ugagggaaacgcccgguua*cauuccgaacc*cggaagcuaag
ucca*gugucuaugacuuagaggua*acac*u*cc*uucccauuccgaacaggc*agguuaag
uguucuuugacgaguaguagcauuggaa*caccu*gaucccaucccgaacu*cagaggugaaa
uggccugguggucauugcgggcucgaaa*caccc*gaucccaucccgaacucggc*cgugaaa
u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaacu*caguugugaaa
uauucugguguccuaggcgua*gaggaaccacacc*aauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucc*aucccgaacu*uggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaaca*cggaagugaaa
u*uaaggcgg*ccauagcggu*gggguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3462.82

第0次pso第129代最好的染色体为：
染色体为:
*ccu*agugac*aauagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*ugg*ugauagcggaggggaaa*caccc*guucccaucccgaa*cacggaaguuaag
u*uu*gguggc*gauagcgaagagguca*cac*ccguucccauaccgaac*acggaaguuaag
u*uu*ggugg*cgauagcgaagagguca*caccc*guucucaugccgaacac*ggaaguuaag
uc*ug*guggc*gauagcgaaga*ggucacaccc*guucccauaccgaaca*cggaaguuaag
uguugugaugauggc*au*uga*gguca*caccu*guucccauaccgaac*acagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggcgac*cauagcguuauggac*ccaccu*gaucccuugccgaacu*caguagugaaa
guuucggu*ggucauagcg*ugagggaaacgcccgguua*cauuccgaacc*cggaagcuaag
ucca*gugucuaugacuuagagguaa*cac*u*cc*uucccauuccgaacaggc*agguuaag
uguucuuugacgaguaguagcauuggaa*caccu*gaucccaucccgaacu*cagaggugaaa
uggccugguggucauugcgggcucgaaa*caccc*gaucccaucccgaacucggc*cgugaaa
u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaacu*caguugugaaa
uauucugguguccuaggcgua*gaggaaccacacc*aauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucc*aucccgaacu*uggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaaca*cggaagugaaa
u*uaaggcgg*ccauagcggu*gggguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3458.94

第0次pso第131代最好的染色体为：
染色体为:
c*cu*agugac*aauagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*uggu*gauagcggaggggaaa*caccc*guucccaucccgaac*acggaaguuaag
u*uu*gguggc*gauagcgaagagguca*cac*ccguucccauaccgaac*acggaaguuaag
u*uu*gguggc*gauagcgaagagguca*caccc*guucucaugccgaacac*ggaaguuaag
uc*ug*guggc*gauagcgaaga*ggucacaccc*guucccauaccgaacac*ggaaguuaag
uguugugaugauggca*u*uga*gguca*caccu*guucccauaccgaac*acagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggcgac*cauagcguuauggac*ccaccu*gaucccuugccgaacu*caguagugaaa
guuucggu*ggucauagcg*ugagggaaacgcccgguua*cauuccgaacc*cggaagcuaag
ucca*gugucuaugacuuagagguaa*cac*u*cc*uucccauuccgaacaggc*agguuaag
uguucuuugacgaguaguagcauuggaa*caccu*gaucccaucccgaacu*cagaggugaaa
uggccugguggucauugcgggcucgaaa*caccc*gaucccaucccgaacucggc*cgugaaa
u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaacu*caguugugaaa
uauucugguguccuaggcgua*gaggaaccacacc*aauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucc*aucccgaacu*uggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaaca*cggaagugaaa
u*uaaggcgg*ccauagcggu*gggguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3428.26

第0次pso第135代最好的染色体为：
染色体为:
c*cu*agugac*aauagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*uggu*gauagcggaggggaaa*caccc*guucccaucccgaac*acggaaguuaag
u*uu*gguggc*gauagcgaagagguca*cac*ccguucccauaccgaac*acggaaguuaag
u*uu*gguggc*gauagcgaagagguca*caccc*guucucaugccgaacac*ggaaguuaag
uc*ug*guggc*gauagcgaaga*ggucacaccc*guucccauaccgaaca*cggaaguuaag
uguugugaugauggca*u*uga*gguca*caccu*guucccauaccgaac*acagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggcgac*cauagcguuauggac*ccaccu*gaucccuugccgaacu*caguagugaaa
guuucggu*ggucauagcg*ugagggaaacgcccgguuac*auuccgaacc*cggaagcuaag
ucca*gugucuaugacuuagagguaa*cac*u*cc*uucccauuccgaacaggca*gguuaag
uguucuuugacgaguaguagcauuggaa*caccu*gaucccaucccgaacu*cagaggugaaa
uggccugguggucauugcgggcucgaaa*caccc*gaucccaucccgaacucgg*ccgugaaa
u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaacu*caguugugaaa
uauucugguguccuaggcgua*gaggaaccacacc*aauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucc*aucccgaacu*uggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaaca*cggaagugaaa
u*uaaggcgg*ccauagcgg*ugggguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3423.41

第0次pso第138代最好的染色体为：
染色体为:
c*cu*agugac*aauagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*uggu*gauagcggaggggaaa*caccc*guucccaucccgaac*acggaaguuaag
u*uu*gguggc*gauagcgaagagguca*cac*ccguucccauaccgaac*acggaaguuaag
u*uu*gguggc*gauagcgaagagguca*caccc*guucucaugccgaacac*ggaaguuaag
uc*ug*guggc*gauagcgaaga*ggucacaccc*guucccauaccgaaca*cggaaguuaag
uguugugaugauggcau**uga*gguca*caccu*guucccauaccgaac*acagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggcgac*cauagcguuauggac*ccaccu*gaucccuugccgaacu*caguagugaaa
guuucggu*ggucauagcg*ugagggaaacgcccgguuac*auuccgaacc*cggaagcuaag
ucca*gugucuaugacuuagagguaa*cac*u*cc*uucccauuccgaacaggc*agguuaag
uguucuuugacgaguaguagcauuggaa*caccu*gaucccaucccgaacu*cagaggugaaa
uggccugguggucauugcgggcucgaaa*caccc*gaucccaucccgaacucgg*ccgugaaa
u*ccuggu*gucuauggcgguau*ggaaccacucugaccccaucccgaacu*caguugugaaa
uauucugguguccuaggcgua*gaggaaccacacc*aauccaucccgaacu*uggugguuaaa
uauucuggugcuccuaggcguagaggaaccaaaccaaucc*aucccgaacu*uggugguuaaa
aauccccgccc*u*uagcggcg*uggaa*caccc*guucccauuccgaaca*cggaagugaaa
u*uaaggcgg*ccauagcggu*gggguuacucc*cguacccaucccgaacacggaaga*uaag
guucacauccgccaggacgcg*gcgauuacacccgguauccagcccgaac*ccggaagcgaaa
适应度为：3417.13

第0次pso第142代最好的染色体为：
染色体为:
c*cu*agugac*aauagc*ggagaggaaacaccc*guucccaucccgaac*acggaaguuaag
cc*uag*uggu*gauagcggaggggaaa*caccc*guucccaucccgaac*acggaaguuaag
u*uu*gguggc*gauagcgaagagguca*cac*ccguucccauaccgaac*acggaaguuaag
u*uu*gguggc*gauagcgaagagguca*caccc*guucucaugccgaacac*ggaaguuaag
uc*ug*guggc*gauagcgaaga*ggucacaccc*guucccauaccgaaca*cggaaguuaag
uguugugaugauggca*u*uga*gguca*caccu*guucccauaccgaac*acagaaguuaag
ugccuggcggc*cguagc*gcgguggucccaccu*gaccccaugccgaacuc*agaagugaaa
ugucuggcggcc*auagc*gcaguggucccaccu*gaucccaugccgaacu*cagaagugaaa
ugcuuggcgac*cauagcguuauggac*ccaccu*gaucccuugccgaacu*caguagugaaa
guuucggu*ggucauagcg*ugagggaaacgcccgguua*cauuccgaacc*cggaagcuaag
ucca*gugucuaugacuuagagguaa*cac*u*cc*uucccauuccgaacaggc*agguuaag