pso_output.txt

粒子群算法与遗传算法用于优化的问题求解,可以解决一些

uc*cuggugucuauggcggu*auggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuuggugg*uuaaa
aau*ccccgcccuuagcgg*cguggaa*cacccg*u*ucccauuccgaacacggaag*ugaaa
uu*aaggcggccauagcggugg*gguuacucccgua*c*ccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccggua*uccagcccgaaccc*ggaagcgaaa
适应度为：3660.8

最佳染色体为:
ccu*a*gugacaauagcg*gagaggaaacacccguu*ccc*aucccgaacacggaa*guuaag
cc*uag*uggugauagcggaggg*gaaacaccc*gu*ucccaucccgaacac*ggaaguuaag
u**uugguggcgauagcg*aagaggucacaccc*gu*ucccauaccgaacacggaaguu*aag
*uuu*gguggcgauagcga*agaggucacacccgu*ucucaugc*cgaacacggaa*guuaag
uc*ug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccug*u*ucccauaccgaacac*agaaguuaag
ugccuggcggccguagcgcg*guggucccaccug*a*ccccaugccgaacuc*agaagugaaa
ugucuggcggccauag*cgcaguggucccaccugau*c*ccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcguu*auggacccacc*uga*ucccuugccgaacucaguag*ugaaa
guuucgguggucauagcg*ugagggaaacgcccggu*uac*auuccgaac*ccggaagcuaag
*ucc*agugucuaugacuuaga*gguaaca*cuccuuccc*auuccgaac*aggcagguuaag
uguucuuugacgaguag*ua*gcauuggaacaccugaucccaucccgaacucaga*ggugaaa
uggcc**ugguggucauugcgggcucgaaacacccgaucccaucccgaacucggcc*gugaaa
uc*cuggugucuauggcggu*auggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuuggugg*uuaaa
aau*ccccgcccuuagcgg*cguggaa*cacccg*u*ucccauuccgaacacggaag*ugaaa
uu*aaggcggccauagcggugg*gguuacucccgua*c*ccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccggua*uccagcccgaaccc*ggaagcgaaa
适应度为：3660.8

出现的周期为:18  出现在该周期的代数为:23
出现最佳的时间为:75140毫秒.
程序运行时间为:78000毫秒.
遗传算法结束,生成最佳染色体。。继续pso算法。。
第0次pso第72代最好的染色体为：
染色体为:
cc*ua*gugacaauagcg*gagaggaaacacccguu*ccc*aucccgaacacggaa*guuaag
cc*uag*uggugauagcggagggg*aaacaccc*gu*ucccaucccgaacac*ggaaguuaag
u**uugguggcgauagcg*aagaggucacaccc*gu*ucccauaccgaacacggaaguu*aag
u*u*ugguggcgauagcga*agaggucacacccgu*ucucaug*ccgaacacggaa*guuaag
uc*ug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccug*u*ucccauaccgaacac*agaaguuaag
ugccuggcggccguagcgcg*guggucccaccug*a*ccccaugccgaacuc*agaagugaaa
ugucuggcggccauag*cgcaguggucccaccugau*c*ccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcg*uuauggacccacc*uga*ucccuugccgaacucaguag*ugaaa
guuucgguggucauagcg*ugagggaaacgcccggu*uac*auuccgaac*ccggaagcuaag
*uc*cagugucuaugacuuaga*gguaaca*cuccuuccc*auuccgaac*aggcagguuaag
uguucuuugacgaguag*ua*gcauuggaacaccugaucccaucccgaacucaga*ggugaaa
uggcc**ugguggucauugcgggcucgaaacacccgaucccaucccgaacucggcc*gugaaa
uc*cuggugucuauggcggu*auggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuuggugg*uuaaa
aau*ccccgcccuuagcgg*cguggaa*cacccg*u*ucccauuccgaacacggaag*ugaaa
uu*aaggcggccauagcgguggg*guuacucccgua*c*ccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccggua*uccagcccgaaccc*ggaagcgaaa
适应度为：3654.84

第0次pso第73代最好的染色体为：
染色体为:
ccu*a*gugacaauagcg*gagaggaaacacccguu*ccc*aucccgaacacggaa*guuaag
cc*uag*uggugauagcggagggg*aaacaccc*gu*ucccaucccgaacac*ggaaguuaag
u**uugguggcgauagcg*aagaggucacacccg*u*ucccauaccgaacacggaag*uuaag
*uuu*gguggcgauagcga*agaggucacacccgu*ucucaugc*cgaacacggaa*guuaag
uc*ug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccug*u*ucccauaccgaacac*agaaguuaag
ugccuggcggccguagcgcg*guggucccaccug*a*ccccaugccgaacuc*agaagugaaa
ugucuggcggccauag*cgcaguggucccaccuga*u*cccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcguu*auggacccaccug*a*ucccuugccgaacucagua*gugaaa
guuucgguggucauagc*gugagggaaacgcccggu*uac*auuccgaac*ccggaagcuaag
*uc*cagugucuaugacuuaga*gguaaca*cuccuuccc*auuccgaac*aggcagguuaag
uguucuuugacgaguag*ua*gcauuggaacaccugaucccaucccgaacucaga*ggugaaa
uggcc**ugguggucauugcgggcucgaaacacccgaucccaucccgaacucggcc*gugaaa
uc*cuggugucuauggcggu*auggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuuggugg*uuaaa
aau*ccccgcccuuagcgg*cguggaa*cacccg*u*ucccauuccgaacacggaag*ugaaa
u*uaaggcggccauagcgguggg*guuacucccgua*c*ccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccggua*uccagcccgaaccc*ggaagcgaaa
适应度为：3653.49

第0次pso第75代最好的染色体为：
染色体为:
cc*ua*gugacaauagcg*gagaggaaacacccguu*cc*caucccgaacacggaa*guuaag
cc*ua*guggugauagcggaggggaa*acacccgu*u*cccaucccgaac*acggaaguuaag
u**uugguggcgauagcg*aagaggucacacccg*u*ucccauaccgaacacggaa*guuaag
u**uugguggcgauagcga*agaggucacacccgu*uc*ucaugccgaacacggaa*guuaag
uc*ug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccug*u*ucccauaccgaaca*cagaaguuaag
ugccuggcggccguagcgcg*guggucccaccug*a*ccccaugccgaacuc*agaagugaaa
ugucuggcggccauag*cgcaguggucccaccug*a*ucccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcguu*auggacccaccuga**ucccuugccgaacucagua*gugaaa
guuucgguggucauag*cgugagggaaacgcccggu*uac*auuccgaac*ccggaagcuaag
u**ccagugucuaugacuua*gagguaaca*cuccuuccc*auuccgaac*aggcagguuaag
uguucuuugacgaguag*ua*gcauuggaacaccugaucccaucccgaacucaga*ggugaaa
uggcc**ugguggucauugcgggcucgaaacacccgaucccaucccgaacucggcc*gugaaa
uc*cuggugucuauggcg*guauggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuuggugg*uuaaa
aau*ccccgcccuuagcgg*cguggaa*cacccgu**ucccauuccgaacacggaag*ugaaa
u*uaaggcggccauagcggugggg*uuacucccgu*a*cccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccggu*auccagcccgaaccc*ggaagcgaaa
适应度为：3612.72

第0次pso第103代最好的染色体为：
染色体为:
cc*ua*gugacaauagcg*gagaggaaacacccguu*cc*caucccgaacacggaa*guuaag
cc*uag*uggugauagcggaggggaa*acacccgu*u*cccaucccgaacacg*gaaguuaag
u**uugguggcgauagcg*aagaggucacacccg*u*ucccauaccgaacacgga*aguuaag
u**uugguggcgauagcga*agaggucacacccgu*u*cucaugccgaacacggaa*guuaag
u*cug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccugu**ucccauaccgaaca*cagaaguuaag
ugccuggcggccguagcg*cgguggucccaccug*a*ccccaugccgaacuc*agaagugaaa
ugucuggcggccauag*cgcaguggucccaccug*a*ucccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcguu*auggacccaccuga**ucccuugccgaacucagua*gugaaa
guuucgguggucauag*cgugagggaaacgcccggu*uac*auuccgaac*ccggaagcuaag
u**ccagugucuaugacuu*agagguaaca*cuccuuccc*auuccgaac*aggcagguuaag
uguucuuugacgaguag*ua*gcauuggaacaccugaucccaucccgaacucagag*gugaaa
uggcc**ugguggucauugcgggcucgaaacacccgaucccaucccgaacucgg*ccgugaaa
uc*cuggugucuauggcggu*auggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuuggugg*uuaaa
aau*ccccgcccuuagcgg*cguggaa*cacccgu**ucccauuccgaacacggaag*ugaaa
uu*aaggcggccauagcgguggg*guuacucccgu*a*cccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccggu*auccagcccgaaccc*ggaagcgaaa
适应度为：3601.11

第0次pso第145代最好的染色体为：
染色体为:
c*cua*gugacaauagcg*gagaggaaacacccguu*ccc*aucccgaacacgg*aaguuaag
cc*uag*uggugauagcggaggggaaa*cacccgu**ucccaucccgaacacgg*aaguuaag
u**uugguggcgauagcg*aagaggucacacccg*u*ucccauaccgaacacggaa*guuaag
u*uug*guggcgauagcga*agaggucacacccgu**ucucaugccgaacacggaa*guuaag
u*cug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccug*u*ucccauaccgaacaca*gaaguuaag
ugccuggcggccguagcgc*gguggucccaccug*a*ccccaugccgaacucag*aagugaaa
ugucuggcggccauag*cgcaguggucccaccuga*uc*ccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcguuau*ggacccaccuga**ucccuugccgaacu*caguagugaaa
guuucgguggucauag*cgugagggaaacgcccggu*uac*auuccgaac*ccggaagcuaag
u*c*cagugucuaugacuu*agagguaaca*cuccuuccc*auuccgaac*aggcagguuaag
uguucuuugacgaguagua**gcauuggaacaccugaucccaucccgaacucagag*gugaaa
uggc*cu*gguggucauugcgggcucgaaacacccgaucccaucccgaacucgg*ccgugaaa
uc*cuggugucuauggcgg*uauggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuugg*ugguuaaa
aauccc*cgcccuuagcgg*cguggaa*cacccg*u*ucccauuccgaacacggaag*ugaaa
u*uaaggcggccauagcggugggguu*acucccgua*c*ccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccgg*uauccagcccgaacccg*gaagcgaaa
适应度为：3600.4

第0次pso第171代最好的染色体为：
染色体为:
c*cua*gugacaauagcg*gagaggaaacacccguu*ccc*aucccgaacacgg*aaguuaag
cc*uag*uggugauagcggaggggaaa*cacccg*u*ucccaucccgaacacgg*aaguuaag
u**uugguggcgauagcg*aagaggucacacccg*u*ucccauaccgaacacggaa*guuaag
u*uug*guggcgauagcga*agaggucacacccgu**ucucaugccgaacacggaa*guuaag
uc*ug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccug*u*ucccauaccgaacaca*gaaguuaag
ugccuggcggccguagcgc*gguggucccaccug*a*ccccaugccgaacucag*aagugaaa
ugucuggcggccauag*cgcaguggucccaccug*a*ucccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcguua*uggacccaccug*a*ucccuugccgaacu*caguagugaaa
guuucgguggucauag*cgugagggaaacgcccggu*ua*cauuccgaac*ccggaagcuaag
u*c*cagugucuaugacuu*agagguaa*cacuccuuccc*auuccgaac*aggcagguuaag
uguucuuugacgaguagua**gcauuggaacaccugaucccaucccgaacucaga*ggugaaa
uggc*cu*gguggucauugcgggcucgaaacacccgaucccaucccgaacucgg*ccgugaaa
uc*cuggugucuauggcgg*uauggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuugg*ugguuaaa
aaucc*ccgcccuuagcgg*cguggaa*cacccg*u*ucccauuccgaacacggaag*ugaaa
uu*aaggcggccauagcggugggg*uuacucccgua**cccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccgg*uauccagcccgaacccg*gaagcgaaa
适应度为：3597.57

第0次pso第175代最好的染色体为：
染色体为:
c*cua*gugacaauagcg*gagaggaaacacccguu*ccc*aucccgaacacgg*aaguuaag
cc*uag*uggugauagcggaggggaaa*cacccg*u*ucccaucccgaacacgg*aaguuaag
u**uugguggcgauagcg*aagaggucacacccgu**ucccauaccgaacacggaa*guuaag
u*uug*guggcgauagcga*agaggucacacccgu**ucucaugccgaacacggaa*guuaag
uc*ug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccugu**ucccauaccgaacacag*aaguuaag
ugccuggcggccguagcgc*gguggucccaccug*a*ccccaugccgaacucag*aagugaaa
ugucuggcggccauag*cgcaguggucccaccug**aucccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcguuau*ggacccaccu*ga*ucccuugccgaacu*caguagugaaa
guuucgguggucauag*cgugagggaaacgcccggu*ua*cauuccgaa*cccggaagcuaag
u*c*cagugucuaugacuu*agagguaacac*uccuuccc*auuccgaac*aggcagguuaag
uguucuuugacgaguagua**gcauuggaacaccugaucccaucccgaacucagag*gugaaa
uggc*cu*gguggucauugcgggcucgaaacacccgaucccaucccgaacucgg*ccgugaaa
uc*cuggugucuauggcgg*uauggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuugg*ugguuaaa
aaucc*ccgcccuuagcgg*cguggaa*cacccg*u*ucccauuccgaacacggaag*ugaaa
u*uaaggcggccauagcggugggg*uuacucccgua**cccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccgguau*ccagcccgaacccg*gaagcgaaa
适应度为：3596.01

第0次pso第176代最好的染色体为：
染色体为:
c*cua*gugacaauagcg*gagaggaaacacccguu*ccc*aucccgaacacgg*aaguuaag
cc*uag*uggugauagcggaggggaaa*cacccg*u*ucccaucccgaacacgg*aaguuaag
u**uugguggcgauagcg*aagaggucacacccgu**ucccauaccgaacacggaa*guuaag
u*uug*guggcgauagcga*agaggucacacccgu**ucucaugccgaacacggaa*guuaag
uc*ug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccugu**ucccauaccgaacacag*aaguuaag
ugccuggcggccguagcgc*gguggucccaccug*a*ccccaugccgaacucag*aagugaaa
ugucuggcggccauag*cgcaguggucccaccug**aucccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcguuau*ggacccacc*uga*ucccuugccgaacu*caguagugaaa
guuucgguggucauag*cgugagggaaacgcccggu*uac*auuccgaa*cccggaagcuaag
u*c*cagugucuaugacuu*agagguaacacuc*cuuccc*auuccgaac*aggcagguuaag
uguucuuugacgaguagua**gcauuggaacaccugaucccaucccgaacucagag*gugaaa
uggc*cu*gguggucauugcgggcucgaaacacccgaucccaucccgaacucgg*ccgugaaa
uc*cuggugucuauggcgg*uauggaaccacucuga*ccccaucccgaacuc*aguugugaaa
uauucugguguccuaggcguagaggaaccacaccaau*cc*aucccgaacuu*ggugguuaaa
uauucuggugcuccuaggcguagaggaac*caaaccaauccaucccgaacuugg*ugguuaaa
aaucc*ccgcccuuagcgg*cguggaa*cacccg*u*ucccauuccgaacacggaag*ugaaa
u*uaaggcggccauagcggugggg*uuacucccgua**cccaucccgaacacggaag*auaag
guucacauccgccaggacgcggcgauuacacccgguau*ccagcccgaacccg*gaagcgaaa
适应度为：3589.17

第0次pso第177代最好的染色体为：
染色体为:
c*cua*gugacaauagcg*gagaggaaacacccguu*ccc*aucccgaacacgg*aaguuaag
cc*uag*uggugauagcggaggggaaa*cacccg*u*ucccaucccgaacacgg*aaguuaag
u**uugguggcgauagcg*aagaggucacacccgu**ucccauaccgaacacggaa*guuaag
u*uug*guggcgauagcga*agaggucacacccgu**ucucaugccgaacacggaa*guuaag
uc*ug*guggcgauagcg*aagaggucacacccguu*c*ccauaccgaacacgga*aguuaag
uguugugaug**auggcauuga*ggucacaccugu**ucccauaccgaacacag*aaguuaag
ugccuggcggccguagcgc*gguggucccaccug*a*ccccaugccgaacucag*aagugaaa
ugucuggcggccauag*cgcaguggucccaccug**aucccaugccgaacuc*agaagugaaa
ugcuuggcgaccauagcguuau*ggacccacc*uga*ucccuugccgaacu*caguagugaaa
guuucgguggucauag*cgugagggaaacgcccggu*uac*auuccgaa*cccggaagcuaag
u*c*cagugucuaugacuu*agagguaacacucc*uuccc*auuccgaac*aggcagguuaag