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<html><head><title>MBS: TextPad Instructions</title></head><body bgcolor="#ffffff"><center>  <h1>Marine Biology Simulation</h1>  <p>&nbsp;</p></center><h3>Information on compiling and running the Marine Biology Simulation program   under DOS and Windows (from a DOS or Command Prompt window):</h3><p>To compile all the necessary files for the Marine Biology Simulation,run the following command within the <code>Code</code> folder:<pre><code>  javac.exe -classpath .;.\mbsbb.jar;.\mbsgui.jar *.java</code></pre>You may need to specify the full path name for the <code>javac.exe</code> file,such as <code>C:\jdk1.2.2\bin\javac.exe</code>.  For your convenience, we haveprovided <code>compMBS.bat</code> (for "Compile MBS") in this folder.  If youwant to use it, move it to the <code>JavaMBS\Code</code> directory and correctthe full path name for <code>javac.exe</code>.  Then run<pre><code>  compMBS</code></pre>which will run the command above to compile all the Java sourcefiles in the current directory (<code>Code</code>).<p>To run the Marine Biology Simulation, run the followingcommand from within the <code>Code</code> folder:<pre><code>  java.exe -classpath .;.\mbsbb.jar;.\mbsgui.jar [target]</code></pre>where <code>[target]</code> should be replaced by one of the following:<pre>    <code>MBSGUI</code>            program with full graphical user interface                        (from beginning of Chapter 1)    <code>SimpleMBSDemo1</code>    simple demo program (end of Chapter 1)    <code>SimpleMBSDemo2</code>    second demo program (end of Chapter 1)</pre>You may need to specify the full path name for the <code>java.exe</code> file,such as <code>C:\jdk1.2.2\bin\java.exe</code>.  For your convenience, we haveprovided <code>runMBS.bat</code> ("Run MBS") in this folder.  If you want touse it, move it to the <code>JavaMBS\Code</code> directory and correct the fullpath name for <code>java.exe</code>.  Then type<pre><code>  runMBS [target]</code></pre>where <code>[target]</code> is one of the three classes listed above.  Thiscommand will run the <code>java.exe</code> command, setting the classpath.  Ifyou do not specify the target, <code>runMBS</code> will use <code>MBSGUI</code>.<p>When you go to open an environment data file, the file chooserwindow should come up in the <code>Code</code> folder, where the program is running.You will need to go up to the <code>JavaMBS</code> folder and then down to the<code>DataFiles</code> folder to find the initial configuration files.<p>For Chapter 3 (and later chapters), if you are using the <code>Fish.java</code> filefrom the <code>DynamicPopulation</code> folder rather than modifying the file in the<code>Code</code> folder (see <code>FishModsForChap3.txt</code> in the <code>Code</code> folder for moredetails), you will also need to execute the following command inthe <code>DynamicPopulation</code> folder:<pre><code>  javac.exe -classpath ..;..\mbsbb.jar;..\mbsgui.jar Fish.java</code></pre>Then copy the <code>Fish.class</code> file from the <code>DynamicPopulation</code> folder to the <code>Code</code> folder before running the usual <code>java.exe</code> command to actually run the simulation. You can copy the <code>compDPop.bat</code> file from this folder to the <code>Code</code> folder and correct the full path name for the <code>javac</code> command as you did in <code>compMBS.bat</code>. Run <code>compDPop</code> from the <code>Code</code> folder. This command will compile the <code>Fish</code> class in the <code>DynamicPopulation</code> folder and then copy the <code>Fish.class</code> file to the <code>Code</code> folder. Then run the Marine Biology Simulation as usual. </body></html>

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