📄 itklistsampletohistogramgenerator.h
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/*=========================================================================
Program: Insight Segmentation & Registration Toolkit
Module: $RCSfile: itkListSampleToHistogramGenerator.h,v $
Language: C++
Date: $Date: 2003/09/10 14:29:46 $
Version: $Revision: 1.5 $
Copyright (c) Insight Software Consortium. All rights reserved.
See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notices for more information.
=========================================================================*/
#ifndef __itkListSampleToHistogramGenerator_h
#define __itkListSampleToHistogramGenerator_h
#include "itkObject.h"
#include "itkListSampleBase.h"
#include "itkHistogram.h"
#include "itkStatisticsAlgorithm.h"
#include "itkDenseFrequencyContainer.h"
namespace itk{
namespace Statistics{
/** \class ListSampleToHistogramGenerator
* \brief Generates a Histogram using the data from the ListSample object
*
* This class is templated over the type of ListSample (which is a subclass of
* ListSampleBase class), the type of measurement values in the histogram, and
* The type of the frequency container that will be used to store frequency
* in the result histogram.
*
* User should plug in the input list sample and specify the number of bins
* along each dimension. For example, if a measurement vector of
* the input list sample has three components, the histogram will be three
* dimensional histogram. So, the SetNumberOfBins() function will accepts
* itk::Size object with three components.
*
* The upper bound and lower bound of the histogram will be automatically
* determined by the FindSampleBound funtion in itkStatisticsAlgorithm.h &
* .txx. The hitogram object's upper bound will be slightly bigger than
* the uppper bound from the FindSampleBound to include the maximum values
* in the Histogram object. To extend the upper bound of the histogram. this
* class internally uses the intervals between two bins and the marginal scale
* constant that you can set using the SetMarginalScale(float) funtion.
* The default marginal scale constant value is 100, which means that the
* upper bound of Histogram will be upper bound of the list sample +
* (bin interval) / 100 ( = marginal scale).
*
* The result historam has equi-size bins along each axe.
*
* NOTE: The second template argument, THistogramMeasurement should be
* float-point type (float or double).
*
* \sa Histogram, ListSampleBase, FindSampleBound
*/
template< class TListSample,
class THistogramMeasurement,
class TFrequencyContainer = DenseFrequencyContainer< float > >
class ITK_EXPORT ListSampleToHistogramGenerator :
public Object
{
public:
/** Standard typedefs */
typedef ListSampleToHistogramGenerator Self;
typedef Object Superclass;
typedef SmartPointer<Self> Pointer;
/** Run-time type information (and related methods). */
itkTypeMacro(ListSampleToHistogramGenerator, Object) ;
/** Method for creation through the object factory. */
itkNewMacro(Self) ;
/** the number of components in a measurement vector */
itkStaticConstMacro(MeasurementVectorSize, unsigned int,
TListSample::MeasurementVectorSize);
typedef Histogram< THistogramMeasurement,
itkGetStaticConstMacro(MeasurementVectorSize),
TFrequencyContainer > HistogramType ;
typedef typename HistogramType::SizeType HistogramSizeType ;
/** plug in the ListSample object */
void SetListSample(TListSample* list)
{ m_List = list ; }
void SetMarginalScale(float scale)
{ m_MarginalScale = scale ; }
void SetNumberOfBins(HistogramSizeType sizes)
{ m_Sizes = sizes ; }
HistogramType* GetOutput()
{ return m_Histogram ; }
void Update()
{ this->GenerateData() ; }
protected:
ListSampleToHistogramGenerator() ;
virtual ~ListSampleToHistogramGenerator() {}
void GenerateData() ;
private:
TListSample* m_List ;
typename HistogramType::Pointer m_Histogram ;
HistogramSizeType m_Sizes ;
float m_MarginalScale ;
} ; // end of class
} // end of namespace Statistics
} // end of namespace itk
#ifndef ITK_MANUAL_INSTANTIATION
#include "itkListSampleToHistogramGenerator.txx"
#endif
#endif
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