1pyt_d.1exf_a.ali

This the implementation of structural SVM for training complex alignment models for protein sequence

1PYT_D:1EXF_A:13:25:259:VVGGEDAIPHS-----WPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNTL----TYRVALGKNNL--EVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAE-----TVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFK-----KPTVFTRVSA-YIDWINQKLQ:KELFSKVDEKDRQKYPYNTIGNVFVKG----QTSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTET-PYGEYEVKEILQEPFGA----GVDLALIRLKPDQNGVSLGDK--ISPAKIGT-SNDLKDGDKLELIGYPF----DHKVNQMHRSEIELTTLSR--------------GLRYYG----FTVPGNSGSGIFNSN---GELVGIHSSKVS------HLDREHQINYGVGIGNYVKRIINEKNE