contents.m

来自「％The Metabolic Networks Toolbox contains」· M 代码 · 共 45 行

%Metabolic Networks Toolbox
%June 2005
%
%The Metabolic Networks Toolbox contains functions to create,
%modify, display, and simulate biochemical reaction networks. 
%The networks are represented by a data structure described in
%'network_structure'.
%
%Run 'demo_small_network' to get a first impression.
%
%FUNCTIONS
%
%Build and query network structure:
%----------------------------------
%
% network_construct                      network constructor
% network_find_metabolites               find indices of metabolites
% network_find_reactions                 find indices of reactions
% network_check                          validate dimensions of network fields
% network_choose                         choose subnetwork
% network_print_formulae                 print reaction formulae
%
%Graphics functions:                     see 'netgraph'
%-------------------
%
%Choice of parameters:
%---------------------
% simulate_sat_kinetics                  choose random parameters for saturated kinetics
% simulate_epsilon                       choose random elasticities
%
%Simulations:
%------------
% network_velocities                     compute metabolic fluxes
% network_integrate                      simulate network dynamics
% network_steady_state                   compute the steady state
%
%Metabolic control analysis              see 'control theory'
%--------------------------
%
%FURTHER HELP TOPICS
% network_structure                      data structure for metabolic networks
% netgraph                               data structure for network graphs
% kinetics_structure                     the different ways to define reaction kinetics
% control_theory                         functions for metabolic control theory