📄 databaseutils.java
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/*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
*/
/*
* DatabaseUtils.java
* Copyright (C) 1999 Len Trigg
*
*/
package weka.experiment;
import java.io.Serializable;
import java.sql.Connection;
import java.sql.DatabaseMetaData;
import java.sql.DriverManager;
import java.sql.PreparedStatement;
import java.sql.ResultSet;
import java.sql.ResultSetMetaData;
import java.sql.SQLException;
import java.sql.Types;
import java.util.Properties;
import java.util.StringTokenizer;
import java.util.Vector;
import weka.core.Utils;
/**
* DatabaseUtils provides utility functions for accessing the experiment
* database. The jdbc
* driver and database to be used default to "jdbc.idbDriver" and
* "jdbc:idb=experiments.prp". These may be changed by creating
* a java properties file called DatabaseUtils.props in user.home or
* the current directory. eg:<p>
*
* <code><pre>
* jdbcDriver=jdbc.idbDriver
* jdbcURL=jdbc:idb=experiments.prp
* </pre></code><p>
*
* @author Len Trigg (trigg@cs.waikato.ac.nz)
* @version $Revision$
*/
public class DatabaseUtils implements Serializable {
/** The name of the table containing the index to experiments */
public static final String EXP_INDEX_TABLE = "Experiment_index";
/** The name of the column containing the experiment type (ResultProducer) */
public static final String EXP_TYPE_COL = "Experiment_type";
/** The name of the column containing the experiment setup (parameters) */
public static final String EXP_SETUP_COL = "Experiment_setup";
/** The name of the column containing the results table name */
public static final String EXP_RESULT_COL = "Result_table";
/** The prefix for result table names */
public static final String EXP_RESULT_PREFIX = "Results";
/** The name of the properties file */
protected static String PROPERTY_FILE
= "weka/experiment/DatabaseUtils.props";
/** Holds the jdbc drivers to be used (only to stop them being gc'ed) */
protected static Vector DRIVERS = new Vector();
/** Properties associated with the database connection */
protected static Properties PROPERTIES;
/* Type mapping used for reading experiment results */
public static final int STRING = 0;
public static final int BOOL = 1;
public static final int DOUBLE = 2;
public static final int BYTE = 3;
public static final int SHORT = 4;
public static final int INTEGER = 5;
public static final int LONG = 6;
public static final int FLOAT = 7;
public static final int DATE = 8;
/* Load the database drivers -- the properties files only get consulted
* when the class is initially loaded, not for every object instantiated
*/
static {
try {
PROPERTIES = Utils.readProperties(PROPERTY_FILE);
// Register the drivers in jdbc DriverManager
String drivers = PROPERTIES.getProperty("jdbcDriver",
"jdbc.idbDriver");
if (drivers == null) {
throw new Exception("No jdbc drivers specified");
}
// The call to newInstance() is necessary on some platforms
// (with some java VM implementations)
StringTokenizer st = new StringTokenizer(drivers, ", ");
while (st.hasMoreTokens()) {
String driver = st.nextToken();
try {
DRIVERS.addElement(Class.forName(driver).newInstance());
System.err.println("Loaded driver: " + driver);
} catch (Exception ex) {
// Drop through
}
}
} catch (Exception ex) {
System.err.println("Problem reading properties. Fix before continuing.");
System.err.println(ex);
}
}
/** Database URL */
protected String m_DatabaseURL;
/* returns key column headings in their original case. Used for
those databases that create uppercase column names. */
protected String attributeCaseFix(String columnName){
if (m_checkForUpperCaseNames==false){
return(columnName);
}
String ucname = columnName.toUpperCase();
if (ucname.equals(EXP_TYPE_COL.toUpperCase())){
return (EXP_TYPE_COL);
} else if (ucname.equals(EXP_SETUP_COL.toUpperCase())){
return (EXP_SETUP_COL);
} else if (ucname.equals(EXP_RESULT_COL.toUpperCase())){
return (EXP_RESULT_COL);
} else {
return(columnName);
}
}
/** Set the database username
*
* @param username Username for Database.
*/
public void setUsername(String username){
m_userName=username;
}
/** Get the database username
*
* @return Database username
*/
public String getUsername(){
return(m_userName);
}
/** Set the database password
*
* @param password Password for Database.
*/
public void setPassword(String password){
m_password=password;
}
/** Get the database password
*
* @return Password for Database.
*/
public String getPassword(){
return(m_password);
}
/**
* translates the column data type string to an integer value that indicates
* which data type / get()-Method to use in order to retrieve values from the
* database (see DatabaseUtils.Properties, InstanceQuery())
* @param type the column type as retrieved with java.sql.MetaData.getColumnTypeName(int)
* @return an integer value that indicates
* which data type / get()-Method to use in order to retrieve values from the
*/
int translateDBColumnType(String type) {
return Integer.parseInt(PROPERTIES.getProperty(type));
}
/** The prepared statement used for database queries. */
protected PreparedStatement m_PreparedStatement;
/** The database connection */
protected Connection m_Connection;
/** True if debugging output should be printed */
protected boolean m_Debug = true;
/** Database username */
protected String m_userName="";
/** Database Password */
protected String m_password="";
/** mappings used for creating Tables. Can be overridden in DatabaseUtils.props*/
protected String m_stringType="LONGVARCHAR";
protected String m_intType="INT";
protected String m_doubleType="DOUBLE";
/* For databases where Tables and Columns are created in upper case */
protected boolean m_checkForUpperCaseNames=false;
/* setAutoCommit on the database? */
protected boolean m_setAutoCommit=true;
/* create index on the database? */
protected boolean m_createIndex=false;
/**
* Sets up the database drivers
*
* @exception Exception if an error occurs
*/
public DatabaseUtils() throws Exception {
m_DatabaseURL = PROPERTIES.getProperty("jdbcURL",
"jdbc:idb=experiments.prp");
m_stringType=PROPERTIES.getProperty("CREATE_STRING");
m_intType=PROPERTIES.getProperty("CREATE_INT");
m_doubleType=PROPERTIES.getProperty("CREATE_DOUBLE");
String uctn=PROPERTIES.getProperty("checkUpperCaseNames");
if (uctn.equals("true")) {
m_checkForUpperCaseNames=true;
}else {
m_checkForUpperCaseNames=false;
}
uctn=PROPERTIES.getProperty("setAutoCommit");
if (uctn.equals("true")) {
m_setAutoCommit=true;
} else {
m_setAutoCommit=false;
}
uctn=PROPERTIES.getProperty("createIndex");
if (uctn.equals("true")) {
m_createIndex=true;
} else {
m_createIndex=false;
}
}
/**
* Converts an array of objects to a string by inserting a space
* between each element. Null elements are printed as ?
*
* @param array the array of objects
* @return a value of type 'String'
*/
public static String arrayToString(Object [] array) {
String result = "";
if (array == null) {
result = "<null>";
} else {
for (int i = 0; i < array.length; i++) {
if (array[i] == null) {
result += " ?";
} else {
result += " " + array[i];
}
}
}
return result;
}
/**
* Returns the name associated with a SQL type.
*
* @param type the SQL type
* @return the name of the type
*/
public static String typeName(int type) {
switch (type) {
case Types.BIGINT :
return "BIGINT ";
case Types.BINARY:
return "BINARY";
case Types.BIT:
return "BIT";
case Types.CHAR:
return "CHAR";
case Types.DATE:
return "DATE";
case Types.DECIMAL:
return "DECIMAL";
case Types.DOUBLE:
return "DOUBLE";
case Types.FLOAT:
return "FLOAT";
case Types.INTEGER:
return "INTEGER";
case Types.LONGVARBINARY:
return "LONGVARBINARY";
case Types.LONGVARCHAR:
return "LONGVARCHAR";
case Types.NULL:
return "NULL";
case Types.NUMERIC:
return "NUMERIC";
case Types.OTHER:
return "OTHER";
case Types.REAL:
return "REAL";
case Types.SMALLINT:
return "SMALLINT";
case Types.TIME:
return "TIME";
case Types.TIMESTAMP:
return "TIMESTAMP";
case Types.TINYINT:
return "TINYINT";
case Types.VARBINARY:
return "VARBINARY";
case Types.VARCHAR:
return "VARCHAR";
default:
return "Unknown";
}
}
/**
* Returns the tip text for this property
* @return tip text for this property suitable for
* displaying in the explorer/experimenter gui
*/
public String databaseURLTipText() {
return "Set the URL to the database.";
}
/**
* Get the value of DatabaseURL.
*
* @return Value of DatabaseURL.
*/
public String getDatabaseURL() {
return m_DatabaseURL;
}
/**
* Set the value of DatabaseURL.
*
* @param newDatabaseURL Value to assign to DatabaseURL.
*/
public void setDatabaseURL(String newDatabaseURL) {
m_DatabaseURL = newDatabaseURL;
}
/**
* Opens a connection to the database
*
* @exception Exception if an error occurs
*/
public void connectToDatabase() throws Exception {
if (m_Debug) {
System.err.println("Connecting to " + m_DatabaseURL);
}
if (m_Connection == null) {
if (m_userName.equals("")) {
m_Connection = DriverManager.getConnection(m_DatabaseURL);
} else {
m_Connection = DriverManager.getConnection(m_DatabaseURL,m_userName,m_password);
}
}
if (m_setAutoCommit){
m_Connection.setAutoCommit(true);
} else {
m_Connection.setAutoCommit(false);
}
}
/**
* Closes the connection to the database.
*
* @exception Exception if an error occurs
*/
public void disconnectFromDatabase() throws Exception {
if (m_Debug) {
System.err.println("Disconnecting from " + m_DatabaseURL);
}
if (m_Connection != null) {
m_Connection.close();
m_Connection = null;
}
}
/**
* Returns true if a database connection is active.
*
* @return a value of type 'boolean'
*/
public boolean isConnected() {
return (m_Connection != null);
}
/**
* Executes a SQL query.
*
* @param query the SQL query
* @return true if the query generated results
* @exception SQLException if an error occurs
*/
public boolean execute(String query) throws SQLException {
m_PreparedStatement = m_Connection.prepareStatement(query);
return(m_PreparedStatement.execute());
}
/**
* Gets the results generated by a previous query.
*
* @return the result set.
* @exception SQLException if an error occurs
*/
public ResultSet getResultSet() throws SQLException {
return m_PreparedStatement.getResultSet();
}
/**
* Checks that a given table exists.
*
* @param tableName the name of the table to look for.
* @return true if the table exists.
* @exception Exception if an error occurs.
*/
public boolean tableExists(String tableName) throws Exception {
if (m_Debug) {
System.err.println("Checking if table " + tableName + " exists...");
}
DatabaseMetaData dbmd = m_Connection.getMetaData();
ResultSet rs;
if (m_checkForUpperCaseNames == true){
rs = dbmd.getTables (null, null, tableName.toUpperCase(), null);
} else {
rs = dbmd.getTables (null, null, tableName, null);
}
boolean tableExists = rs.next();
if (rs.next()) {
throw new Exception("This table seems to exist more than once!");
}
rs.close();
if (m_Debug) {
if (tableExists) {
System.err.println("... " + tableName + " exists");
} else {
System.err.println("... " + tableName + " does not exist");
}
}
return tableExists;
}
/**
* Executes a database query to see whether a result for the supplied key
* is already in the database.
*
* @param tableName the name of the table to search for the key in
* @param rp the ResultProducer who will generate the result if required
* @param key the key for the result
* @return true if the result with that key is in the database already
* @exception Exception if an error occurs
*/
protected boolean isKeyInTable(String tableName,
ResultProducer rp,
Object[] key)
throws Exception {
String query = "SELECT Key_Run"
+ " FROM " + tableName;
String [] keyNames = rp.getKeyNames();
if (keyNames.length != key.length) {
throw new Exception("Key names and key values of different lengths");
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