xxxy3

These files contain a port, to Python of the inexact string matching functionality of agrep.

ID   AXD005     standard; DNA; PRO; 1462 BP.
XX
AC   D88005;
XX
SV   D88005.1
XX
NI   d1070555
XX
DT   02-NOV-1996 (Rel. 49, Created)
DT   04-JUN-1999 (Rel. 59, Last updated, Version 2)
XX
DE   Alcaligenes xylosoxidans DNA for 16S ribosomal RNA.
XX
KW   16S ribosomal RNA.
XX
OS   Achromobacter xylosoxidans subsp. xylosoxidans
OC   Bacteria; Proteobacteria; beta subdivision; Alcaligenaceae;
OC   Achromobacter; Achromobacter xylosoxidans.
XX
RN   [1]
RP   1-1462
RA   Kunitho T.;
RT   ;
RL   Submitted (25-SEP-1996) to the EMBL/GenBank/DDBJ databases.
RL   Takashi Kunitho, University of Tokyo, Graduate school of Agriculture and
RL   Agricultural life science; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113, Japan
RL   (E-mail:[e-mail], Tel:[phone],
RL   Fax:[phone])
XX
RN   [2]
RP   1-1462
RA   Anzai Y., Koseki Y., Kunito T., Kim H., Shibata S., Kawasaki H.,
RA   Oyaizu H.;
RT   "Taxonomic study of metalotorelant strains of genus Ralstonia: Proposal
RT   for three new species, Ralstonia metalotorelans sp. nov., Ralstonia
RT   silverii sp. nov., and Ralstonia tsushimaensis sp. nov.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1462
FT                   /db_xref="taxon:515"
FT                   /sequenced_mol="DNA"
FT                   /organism="Achromobacter xylosoxidans subsp. xylosoxidans"
FT                   /strain="IAM12684"
FT                   /sub_species="xylosoxidans"
FT   rRNA            1..1462
FT                   /product="16S ribosomal RNA"
XX
SQ   Sequence 1462 BP; 372 A; 344 C; 460 G; 285 T; 1 other;
>AXD005
acgctagcgggatgccttacacatgcaagtcgaacggcagcacggacttcggtctggtggcgagtggcgaacgggtgagtaatgtatcggaacgtgcccagtagcgggggataactacgcgaaagcgtagctaataccgcatacgccctacgggggaaagcaggggatcgcaagaccttgcactattggagcggccgatatcggattagctagttggtggggtaacggctcaccaaggcgacgatccgtagctggtttgagaggacgaccagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttggacaatgggggaaaccctgatccagccatcccgcgtgttcgatgaaggccttcgggttgtaaagcacttttngcaggaaagaacgtcgcgggttaatacctcgcgaacttacggtaccttgcagaataagcaccggctaactacgtgccagcagccgcggtaatacgtagggtgcaagcgttaatcggaattactgggcgtaaagcgtgcgcaggcggttcggaaagaaagatgtgaaatcccagagcttaactttggaactgcatttttaactaccgggctagagtgtgtcagagggaggtggaattccgcgtgtagcagtgaaatgcgtagatatgcggaggaacaccgatggcgaaggcagcctcctgggataacactgacgctcatgcacgaaagcgtggggagcaaacaggattagataccctggtagtccacgccctaaacgatgtcaactagctgttggggccttcgggccttggtagcgcacgtaacgcgtgaagttgaccgcctggggagtacggtcgcaagattaaaactcaaaggaattgacggggacccgcacaagcggtggatgatgtggattaattcgatgcaacgcgaaaaaccttacctacccttgacatgtctggaatgccgaagagatttggcagtgctcgcaagagaaccggaacacaggtgctgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgtcattagttgctacgaaagggcactctaatgagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcctcatggcccttatgggtagggcttcacacgtcatacaatggtcgggacagagggtcgccaacccgcgagggggagccaatcccagaaacccgatcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcggatcagcatgtcgcggtgaatacgttcccgggtcttgtacacaccgcccgtcacaaccatgggagtgggtttaccagaagtagttagcctaaccgcaaggggggcgattaccacggtaggattcatgactggggtgaagtcgtaacaaggt