out.errs1

These files contain a port, to Python of the inexact string matching functionality of agrep.

Input line ID   A16SRRNA   standard; DNA; PRO; 1497 BP.
None
Input line OC   Bacteria, Firmicutes, Actinobacteria, Actinobacteridae, Actinomycetales,
None
Input line OS   Actinomycetaceae  ok
[(5, 21)]
Input line OX   Actinimycetaceae  subst i
[(5, 21)]
Input line OY   ctinomycetaceae.  front del
[(5, 20)]
Input line OZ   Actinomyctaceae"  mid del ct
[(5, 20)]
Input line OP   Actinomycetacea"  end del
[(5, 20)]
Input line OQ   Actinomycretaceae  ins
[(5, 22)]
Input line OR   Actinimycretaceae  subst + ins
None
Input line OS   ActonimycAetaceae  2*subst + ins
None
Input line OT   Actinomycetatinomyctaceae.  front del
None
Input line FT   /organism="ActinomyctaceaeActinomycetacea" abutting
[(16, 31), (31, 46)]
Input line FT   /organism="Actinomyctaceae"  or "Actinomycetacea" small separation
[(16, 31), (38, 53)]
Input line FT   /organism="Actinomyctaceae" separated by a large space from organism="Actinomycetacea"
[(16, 31), (75, 90)]