asint1x2.dgd

mfold

Data tables for asymmetric interior loops of size 3 
Free energies at 37 degrees for DNA 
Data arrangement: 
 
            Y 
    ------------------ 
(X)  A    C    G    T   
    ------------------ 
        5' --> 3' 
            X 
           A  A 
           T  T 
            YA 
        3' <-- 5' 
(A)  .    .    .    .    
(C)  .    .    .    .    
(G)  .    .    .    .    
(T)  .    .    .    .    
 
 
            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           A  A                    A  C                    A  G                    A  T                    A  G                    A  T 
           T  T                    T  G                    T  C                    T  A                    T  T                    T  G 
            YA                      YA                      YA                      YA                      YA                      YA 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  1.80  2.00  1.90  2.50  1.30  1.50  1.40  2.00  1.40  1.60  1.50  2.10  1.70  1.90  1.80  2.40  1.90  2.10  2.00  2.60  1.90  2.10  2.00  2.60 
  2.10  2.30  2.20  2.20  1.80  2.00  1.90  1.90  1.90  2.10  2.00  2.00  2.10  2.30  2.20  2.20  2.40  2.60  2.50  2.50  2.40  2.60  2.50  2.50 
  1.90  2.30  1.90  2.50  1.50  1.90  1.50  2.10  1.60  2.00  1.60  2.20  1.90  2.30  1.90  2.50  2.00  2.40  2.00  2.60  2.00  2.40  2.00  2.60 
  3.10  2.70  3.10  2.50  2.60  2.20  2.60  2.00  2.70  2.30  2.70  2.10  3.10  2.70  3.10  2.50  3.10  2.70  3.10  2.50  2.90  2.50  2.90  2.30 

            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           A  A                    A  C                    A  G                    A  T                    A  G                    A  T 
           T  T                    T  G                    T  C                    T  A                    T  T                    T  G 
            YC                      YC                      YC                      YC                      YC                      YC 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  1.90  2.10  2.00  2.60  1.60  1.80  1.70  2.30  1.70  1.90  1.80  2.40  1.90  2.10  2.00  2.60  2.20  2.40  2.30  2.90  2.20  2.40  2.30  2.90 
  2.30  2.50  2.40  2.40  2.00  2.20  2.10  2.10  2.10  2.30  2.20  2.20  2.30  2.50  2.40  2.40  2.40  2.60  2.50  2.50  2.40  2.60  2.50  2.50 
  2.00  2.40  2.00  2.60  1.20  1.60  1.20  1.80  1.70  2.10  1.70  2.30  2.10  2.50  2.10  2.70  2.20  2.60  2.20  2.80  2.10  2.50  2.10  2.70 
  2.70  2.30  2.70  2.10  2.40  2.00  2.40  1.80  2.40  2.00  2.40  1.80  2.70  2.30  2.70  2.10  2.90  2.50  2.90  2.30  2.90  2.50  2.90  2.30 

            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           A  A                    A  C                    A  G                    A  T                    A  G                    A  T 
           T  T                    T  G                    T  C                    T  A                    T  T                    T  G 
            YG                      YG                      YG                      YG                      YG                      YG 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  1.80  2.00  1.90  2.50  1.40  1.60  1.50  2.10  1.50  1.70  1.60  2.20  1.80  2.00  1.90  2.50  1.90  2.10  2.00  2.60  1.90  2.10  2.00  2.60 
  2.60  2.80  2.70  2.70  1.80  2.00  1.90  1.90  1.50  1.70  1.60  1.60  2.40  2.60  2.50  2.50  2.10  2.30  2.20  2.20  2.20  2.40  2.30  2.30 
  1.90  2.30  1.90  2.50  1.50  1.90  1.50  2.10  1.60  2.00  1.60  2.20  1.90  2.30  1.90  2.50  2.00  2.40  2.00  2.60  2.00  2.40  2.00  2.60 
  3.10  2.70  3.10  2.50  2.80  2.40  2.80  2.20  2.60  2.20  2.60  2.00  3.10  2.70  3.10  2.50  3.10  2.70  3.10  2.50  3.10  2.70  3.10  2.50 

            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           A  A                    A  C                    A  G                    A  T                    A  G                    A  T 
           T  T                    T  G                    T  C                    T  A                    T  T                    T  G 
            YT                      YT                      YT                      YT                      YT                      YT 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  2.40  2.60  2.50  3.10  2.00  2.20  2.10  2.70  2.20  2.40  2.30  2.90  2.40  2.60  2.50  3.10  2.40  2.60  2.50  3.10  2.40  2.60  2.50  3.10 
  2.20  2.40  2.30  2.30  1.90  2.10  2.00  2.00  1.90  2.10  2.00  2.00  2.20  2.40  2.30  2.30  2.40  2.60  2.50  2.50  2.40  2.60  2.50  2.50 
  2.40  2.80  2.40  3.00  2.10  2.50  2.10  2.70  2.10  2.50  2.10  2.70  2.50  2.90  2.50  3.10  2.50  2.90  2.50  3.10  2.50  2.90  2.50  3.10 
  2.50  2.10  2.50  1.90  2.20  1.80  2.20  1.60  2.20  1.80  2.20  1.60  2.50  2.10  2.50  1.90  2.90  2.50  2.90  2.30  2.90  2.50  2.90  2.30 

            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           C  A                    C  C                    C  G                    C  T                    C  G                    C  T 
           G  T                    G  G                    G  C                    G  A                    G  T                    G  G 
            YA                      YA                      YA                      YA                      YA                      YA 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  1.50  1.80  1.60  2.10  1.00  1.30  1.10  1.60  1.10  1.40  1.20  1.70  1.40  1.70  1.50  2.00  1.60  1.90  1.70  2.20  1.60  1.90  1.70  2.20 
  1.90  2.10  1.80  1.90  1.60  1.80  1.50  1.60  1.70  1.90  1.60  1.70  1.90  2.10  1.80  1.90  2.20  2.40  2.10  2.20  2.20  2.40  2.10  2.20 
  1.60  1.40  1.60  2.00  1.20  1.00  1.20  1.60  1.30  1.10  1.30  1.70  1.60  1.40  1.60  2.00  1.70  1.50  1.70  2.10  1.70  1.50  1.70  2.10 
  2.90  2.40  2.70  2.20  2.40  1.90  2.20  1.70  2.50  2.00  2.30  1.80  2.90  2.40  2.70  2.20  2.90  2.40  2.70  2.20  2.70  2.20  2.50  2.00 

            Y                       Y                       Y                       Y                       Y                       Y