sint4.dh

mfold

Data tables for symetric interior loops of size 4 
Enthalpies for RNA                  
Data arrangement: 
 
                                Y 
     ---------------------------------------------------------------- 
(X)   A   A   A   A   C   C   C   C   G   G   G   G   U   U   U   U 
      A   C   G   U   A   C   G   U   A   C   G   U   A   C   G   U 
     ---------------------------------------------------------------- 
                           5' ------> 3' 
                            A \/ \_/ A 
                            U /\  |  U 
                           3' <------ 5' 
 
(AA)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(AC)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(AG)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(AU)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(CA)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(CC)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(CG)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(CU)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(GA)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(GC)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(GG)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(GU)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(UA)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(UC)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(UG)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
(UU)  .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   .   
   
 
                                               Y 
   --------------------------------------------------------------------------------------------- 
    A     A     A     A     C     C     C     C     G     G     G     G     U     U     U     U   
    A     C     G     U     A     C     G     U     A     C     G     U     A     C     G     U   
   --------------------------------------------------------------------------------------------- 
                                          5' ------> 3' 
                                           A \/ \_/ A 
                                           U /\  |  U 
                                          3' <------ 5' 
 -8.30 -8.60 -8.10 -7.10-10.60 -9.40-11.10 -5.70-13.20 -6.30-13.20 -7.10-10.20 -6.10-11.10 -5.70 
-10.00-10.30 -9.80 -8.80-12.30-11.10-12.80 -7.40-14.90 -8.00-14.90 -8.80-11.90 -7.80-12.80 -7.40 
-10.00-10.30 -9.80 -8.80-12.30-11.10-12.80 -7.40-14.90 -8.00-14.90 -8.80-11.90 -7.80-12.80 -7.40 
-10.00-10.30 -9.80 -8.80-12.30-11.10-12.80 -7.40-14.90 -8.00-14.90 -8.80-11.90 -7.80-12.80 -7.40 
 -6.60 -6.90 -6.40 -5.40 -8.90 -7.70 -9.40 -4.00-11.50 -4.60-11.50 -5.40 -8.50 -4.40 -9.40 -4.00 
 -6.40 -6.70 -6.20 -5.20 -8.70 -7.50 -9.20 -3.80-11.30 -4.40-11.30 -5.20 -8.30 -4.20 -9.20 -3.80 
 -6.40 -6.70 -6.20 -5.20 -8.70 -7.50 -9.20 -3.80-11.30 -4.40-11.30 -5.20 -8.30 -4.20 -9.20 -3.80 
 -6.40 -6.70 -6.20 -5.20 -8.70 -7.50 -9.20 -3.80-11.30 -4.40-11.30 -5.20 -8.30 -4.20 -9.20 -3.80 
 -7.40 -7.70 -7.20 -6.20 -9.70 -8.50-10.20 -4.80-12.30 -5.40-12.30 -6.20 -9.30 -5.20-10.20 -4.80 
-10.90-11.20-10.70 -9.70-13.20-12.00-13.70 -8.30-15.80 -8.90-15.80 -9.70-12.80 -8.70-13.70 -8.30 
-10.90-11.20-10.70 -9.70-13.20-12.00-13.70 -8.30-15.80 -8.90-15.80 -9.70-12.80 -8.70-13.70 -8.30 
-10.90-11.20-10.70 -9.70-13.20-12.00-13.70 -8.30-15.80 -8.90-15.80 -9.70-12.80 -8.70-13.70 -8.30 
 -7.30 -7.60 -7.10 -6.10 -9.60 -8.40-10.10 -4.70-12.20 -5.30-12.20 -6.10 -9.20 -5.10-10.10 -4.70 
 -7.30 -7.60 -7.10 -6.10 -9.60 -8.40-10.10 -4.70-12.20 -5.30-12.20 -6.10 -9.20 -5.10-10.10 -4.70 
 -7.30 -7.60 -7.10 -6.10 -9.60 -8.40-10.10 -4.70-12.20 -5.30-12.20 -6.10 -9.20 -5.10-10.10 -4.70 
 -7.30 -7.60 -7.10 -6.10 -9.60 -8.40-10.10 -4.70-12.20 -5.30-12.20 -6.10 -9.20 -5.10-10.10 -4.70 
 
                                               Y 
   --------------------------------------------------------------------------------------------- 
    A     A     A     A     C     C     C     C     G     G     G     G     U     U     U     U   
    A     C     G     U     A     C     G     U     A     C     G     U     A     C     G     U   
   --------------------------------------------------------------------------------------------- 
                                          5' ------> 3' 
                                           A \/ \_/ C 
                                           U /\  |  G 
                                          3' <------ 5' 
 -9.50-11.50-11.40 -9.30-13.10 -7.40-11.70 -9.30 -9.90 -7.40-10.50 -9.30-13.10 -8.20-11.70-10.00 
-11.20-13.20-13.10-11.00-14.80 -9.10-13.40-11.00-11.60 -9.10-12.20-11.00-14.80 -9.90-13.40-11.70 
-11.20-13.20-13.10-11.00-14.80 -9.10-13.40-11.00-11.60 -9.10-12.20-11.00-14.80 -9.90-13.40-11.70 
-11.20-13.20-13.10-11.00-14.80 -9.10-13.40-11.00-11.60 -9.10-12.20-11.00-14.80 -9.90-13.40-11.70 
 -7.80 -9.80 -9.70 -7.60-11.40 -5.70-10.00 -7.60 -8.20 -5.70 -8.80 -7.60-11.40 -6.50-10.00 -8.30 
 -7.60 -9.60 -9.50 -7.40-11.20 -5.50 -9.80 -7.40 -8.00 -5.50 -8.60 -7.40-11.20 -6.30 -9.80 -8.10 
 -7.60 -9.60 -9.50 -7.40-11.20 -5.50 -9.80 -7.40 -8.00 -5.50 -8.60 -7.40-11.20 -6.30 -9.80 -8.10 
 -7.60 -9.60 -9.50 -7.40-11.20 -5.50 -9.80 -7.40 -8.00 -5.50 -8.60 -7.40-11.20 -6.30 -9.80 -8.10 
 -8.60-10.60-10.50 -8.40-12.20 -6.50-10.80 -8.40 -9.00 -6.50 -9.60 -8.40-12.20 -7.30-10.80 -9.10 
-12.10-14.10-14.00-11.90-15.70-10.00-14.30-11.90-12.50-10.00-13.10-11.90-15.70-10.80-14.30-12.60 
-12.10-14.10-14.00-11.90-15.70-10.00-14.30-11.90-12.50-10.00-13.10-11.90-15.70-10.80-14.30-12.60 
-12.10-14.10-14.00-11.90-15.70-10.00-14.30-11.90-12.50-10.00-13.10-11.90-15.70-10.80-14.30-12.60 
 -8.50-10.50-10.40 -8.30-12.10 -6.40-10.70 -8.30 -8.90 -6.40 -9.50 -8.30-12.10 -7.20-10.70 -9.00 
 -8.50-10.50-10.40 -8.30-12.10 -6.40-10.70 -8.30 -8.90 -6.40 -9.50 -8.30-12.10 -7.20-10.70 -9.00 
 -8.50-10.50-10.40 -8.30-12.10 -6.40-10.70 -8.30 -8.90 -6.40 -9.50 -8.30-12.10 -7.20-10.70 -9.00 
 -8.50-10.50-10.40 -8.30-12.10 -6.40-10.70 -8.30 -8.90 -6.40 -9.50 -8.30-12.10 -7.20-10.70 -9.00 
 
                                               Y 
   --------------------------------------------------------------------------------------------- 
    A     A     A     A     C     C     C     C     G     G     G     G     U     U     U     U   
    A     C     G     U     A     C     G     U     A     C     G     U     A     C     G     U   
   --------------------------------------------------------------------------------------------- 
                                          5' ------> 3' 
                                           A \/ \_/ G 
                                           U /\  |  C 
                                          3' <------ 5' 
 -4.00 -9.50-13.70-12.40  5.20 -8.80-13.70-11.70  6.00 -9.50-13.70-12.40-14.60-11.00-13.70-12.90 
 -5.70-11.20-15.40-14.10  3.50-10.50-15.40-13.40  4.30-11.20-15.40-14.10-16.30-12.70-15.40-14.60 
 -5.70-11.20-15.40-14.10  3.50-10.50-15.40-13.40  4.30-11.20-15.40-14.10-16.30-12.70-15.40-14.60 
 -5.70-11.20-15.40-14.10  3.50-10.50-15.40-13.40  4.30-11.20-15.40-14.10-16.30-12.70-15.40-14.60 
 -2.30 -7.80-12.00-10.70  6.90 -7.10-12.00-10.00  7.70 -7.80-12.00-10.70-12.90 -9.30-12.00-11.20 
 -2.10 -7.60-11.80-10.50  7.10 -6.90-11.80 -9.80  7.90 -7.60-11.80-10.50-12.70 -9.10-11.80-11.00 
 -2.10 -7.60-11.80-10.50  7.10 -6.90-11.80 -9.80  7.90 -7.60-11.80-10.50-12.70 -9.10-11.80-11.00 
 -2.10 -7.60-11.80-10.50  7.10 -6.90-11.80 -9.80  7.90 -7.60-11.80-10.50-12.70 -9.10-11.80-11.00 
 -3.10 -8.60-12.80-11.50  6.10 -7.90-12.80-10.80  6.90 -8.60-12.80-11.50-13.70-10.10-12.80-12.00 
 -6.60-12.10-16.30-15.00  2.60-11.40-16.30-14.30  3.40-12.10-16.30-15.00-17.20-13.60-16.30-15.50 
 -6.60-12.10-16.30-15.00  2.60-11.40-16.30-14.30  3.40-12.10-16.30-15.00-17.20-13.60-16.30-15.50 
 -6.60-12.10-16.30-15.00  2.60-11.40-16.30-14.30  3.40-12.10-16.30-15.00-17.20-13.60-16.30-15.50 
 -3.00 -8.50-12.70-11.40  6.20 -7.80-12.70-10.70  7.00 -8.50-12.70-11.40-13.60-10.00-12.70-11.90 
 -3.00 -8.50-12.70-11.40  6.20 -7.80-12.70-10.70  7.00 -8.50-12.70-11.40-13.60-10.00-12.70-11.90 
 -3.00 -8.50-12.70-11.40  6.20 -7.80-12.70-10.70  7.00 -8.50-12.70-11.40-13.60-10.00-12.70-11.90 
 -3.00 -8.50-12.70-11.40  6.20 -7.80-12.70-10.70  7.00 -8.50-12.70-11.40-13.60-10.00-12.70-11.90 
 
                                               Y 
   --------------------------------------------------------------------------------------------- 
    A     A     A     A     C     C     C     C     G     G     G     G     U     U     U     U   
    A     C     G     U     A     C     G     U     A     C     G     U     A     C     G     U   
   --------------------------------------------------------------------------------------------- 
                                          5' ------> 3' 
                                           A \/ \_/ U 
                                           U /\  |  A 
                                          3' <------ 5' 
 -8.60 -6.90 -7.70 -7.60-10.30 -6.70-11.20 -7.60-10.30 -6.70-11.20 -7.60-10.30 -6.70-11.20 -7.60 
-10.30 -8.60 -9.40 -9.30-12.00 -8.40-12.90 -9.30-12.00 -8.40-12.90 -9.30-12.00 -8.40-12.90 -9.30 
-10.30 -8.60 -9.40 -9.30-12.00 -8.40-12.90 -9.30-12.00 -8.40-12.90 -9.30-12.00 -8.40-12.90 -9.30 
-10.30 -8.60 -9.40 -9.30-12.00 -8.40-12.90 -9.30-12.00 -8.40-12.90 -9.30-12.00 -8.40-12.90 -9.30 
 -6.90 -5.20 -6.00 -5.90 -8.60 -5.00 -9.50 -5.90 -8.60 -5.00 -9.50 -5.90 -8.60 -5.00 -9.50 -5.90 
 -6.70 -5.00 -5.80 -5.70 -8.40 -4.80 -9.30 -5.70 -8.40 -4.80 -9.30 -5.70 -8.40 -4.80 -9.30 -5.70 
 -6.70 -5.00 -5.80 -5.70 -8.40 -4.80 -9.30 -5.70 -8.40 -4.80 -9.30 -5.70 -8.40 -4.80 -9.30 -5.70 
 -6.70 -5.00 -5.80 -5.70 -8.40 -4.80 -9.30 -5.70 -8.40 -4.80 -9.30 -5.70 -8.40 -4.80 -9.30 -5.70 
 -7.70 -6.00 -6.80 -6.70 -9.40 -5.80-10.30 -6.70 -9.40 -5.80-10.30 -6.70 -9.40 -5.80-10.30 -6.70 
-11.20 -9.50-10.30-10.20-12.90 -9.30-13.80-10.20-12.90 -9.30-13.80-10.20-12.90 -9.30-13.80-10.20 
-11.20 -9.50-10.30-10.20-12.90 -9.30-13.80-10.20-12.90 -9.30-13.80-10.20-12.90 -9.30-13.80-10.20 
-11.20 -9.50-10.30-10.20-12.90 -9.30-13.80-10.20-12.90 -9.30-13.80-10.20-12.90 -9.30-13.80-10.20 
 -7.60 -5.90 -6.70 -6.60 -9.30 -5.70-10.20 -6.60 -9.30 -5.70-10.20 -6.60 -9.30 -5.70-10.20 -6.60 
 -7.60 -5.90 -6.70 -6.60 -9.30 -5.70-10.20 -6.60 -9.30 -5.70-10.20 -6.60 -9.30 -5.70-10.20 -6.60 
 -7.60 -5.90 -6.70 -6.60 -9.30 -5.70-10.20 -6.60 -9.30 -5.70-10.20 -6.60 -9.30 -5.70-10.20 -6.60 
 -7.60 -5.90 -6.70 -6.60 -9.30 -5.70-10.20 -6.60 -9.30 -5.70-10.20 -6.60 -9.30 -5.70-10.20 -6.60 
 
                                               Y 
   --------------------------------------------------------------------------------------------- 
    A     A     A     A     C     C     C     C     G     G     G     G     U     U     U     U   
    A     C     G     U     A     C     G     U     A     C     G     U     A     C     G     U   
   --------------------------------------------------------------------------------------------- 
                                          5' ------> 3' 
                                           A \/ \_/ G 
                                           U /\  |  U 
                                          3' <------ 5' 
-11.50 -9.10-10.90 -9.80-12.20 -9.10-12.40 -8.70-13.90 -7.90-13.50 -9.80-12.40 -9.10-12.40 -7.90 
-13.20-10.80-12.60-11.50-13.90-10.80-14.10-10.40-15.60 -9.60-15.20-11.50-14.10-10.80-14.10 -9.60 
-13.20-10.80-12.60-11.50-13.90-10.80-14.10-10.40-15.60 -9.60-15.20-11.50-14.10-10.80-14.10 -9.60 
-13.20-10.80-12.60-11.50-13.90-10.80-14.10-10.40-15.60 -9.60-15.20-11.50-14.10-10.80-14.10 -9.60 
 -9.80 -7.40 -9.20 -8.10-10.50 -7.40-10.70 -7.00-12.20 -6.20-11.80 -8.10-10.70 -7.40-10.70 -6.20 
 -9.60 -7.20 -9.00 -7.90-10.30 -7.20-10.50 -6.80-12.00 -6.00-11.60 -7.90-10.50 -7.20-10.50 -6.00 
 -9.60 -7.20 -9.00 -7.90-10.30 -7.20-10.50 -6.80-12.00 -6.00-11.60 -7.90-10.50 -7.20-10.50 -6.00 
 -9.60 -7.20 -9.00 -7.90-10.30 -7.20-10.50 -6.80-12.00 -6.00-11.60 -7.90-10.50 -7.20-10.50 -6.00 
-10.60 -8.20-10.00 -8.90-11.30 -8.20-11.50 -7.80-13.00 -7.00-12.60 -8.90-11.50 -8.20-11.50 -7.00 
-14.10-11.70-13.50-12.40-14.80-11.70-15.00-11.30-16.50-10.50-16.10-12.40-15.00-11.70-15.00-10.50