asint1x2.ent

mfold

Data tables for asymmetric interior loops of size 3                   
Free energies at entdegrees for DNA                                   
Data arrangement:                                                     
                                                                      
            Y                                                         
    ------------------                                                
(X)  A    C    G    T                                                 
    ------------------                                                
        5' --> 3'                                                     
            X                                                         
           A  A                                                       
           T  T                                                       
            YA                                                        
        3' <-- 5'                                                     
(A)  .    .    .    .                                                 
(C)  .    .    .    .                                                 
(G)  .    .    .    .                                                 
(T)  .    .    .    .                                                 
                                                                                                                                                
                                                                                                                                                
            Y                       Y                       Y                       Y                       Y                       Y           
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'       
            X                       X                       X                       X                       X                       X           
           A  A                    A  C                    A  G                    A  T                    A  G                    A  T         
           T  T                    T  G                    T  C                    T  A                    T  T                    T  G         
            YA                      YA                      YA                      YA                      YA                      YA          
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'       
 -1.87 -1.93 -1.90 -4.00 -2.35 -2.42 -2.39 -4.48 -2.39 -2.45 -2.42 -4.51 -1.84 -1.90 -1.87 -3.97 -1.26 -1.32 -1.29 -3.39 -1.26 -1.32 -1.29 -3.39
 -1.97 -2.03 -4.06 -2.00 -2.51 -2.58 -4.61 -2.55 -2.55 -2.61 -4.64 -2.58 -1.97 -2.03 -4.06 -2.00 -1.42 -1.48 -3.51 -1.45 -1.42 -1.48 -3.51 -1.45
 -1.90 -3.90 -1.90 -1.13 -2.42 -4.42 -2.42 -1.64 -2.45 -4.45 -2.45 -1.68 -1.90 -3.90 -1.90 -1.13 -1.29 -3.29 -1.29 -0.52 -1.29 -3.29 -1.29 -0.52
 -5.64 -3.84 -4.13 -3.77 -5.80 -4.00 -4.29 -3.93 -5.93 -4.13 -4.42 -4.06 -5.87 -4.06 -4.35 -4.00 -3.35 -1.55 -1.84 -1.48 -3.68 -1.87 -2.16 -1.81
                                                                                                                                                
            Y                       Y                       Y                       Y                       Y                       Y           
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'       
            X                       X                       X                       X                       X                       X           
           A  A                    A  C                    A  G                    A  T                    A  G                    A  T         
           T  T                    T  G                    T  C                    T  A                    T  T                    T  G         
            YC                      YC                      YC                      YC                      YC                      YC          
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'       
 -1.90 -1.97 -1.93 -4.03 -2.45 -2.51 -2.48 -4.58 -2.48 -2.55 -2.51 -4.61 -1.90 -1.97 -1.93 -4.03 -1.35 -1.42 -1.39 -3.48 -1.35 -1.42 -1.39 -3.48
 -2.03 -2.10 -4.13 -2.06 -2.58 -2.64 -4.68 -2.61 -2.61 -2.68 -4.71 -2.64 -2.03 -2.10 -4.13 -2.06 -1.42 -1.48 -3.51 -1.45 -1.42 -1.48 -3.51 -1.45
 -3.93 -5.93 -3.93 -3.16 -4.19 -6.19 -4.19 -3.42 -3.77 -5.77 -3.77 -3.00 -4.03 -6.03 -4.03 -3.26 -0.29 -2.29 -0.29  0.48  0.10 -1.90  0.10  0.87
 -3.84 -2.03 -2.32 -1.97 -4.38 -2.58 -2.87 -2.51 -4.38 -2.58 -2.87 -2.51 -3.84 -2.03 -2.32 -1.97 -3.26 -1.45 -1.74 -1.39 -3.26 -1.45 -1.74 -1.39
                                                                                                                                                
            Y                       Y                       Y                       Y                       Y                       Y           
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'       
            X                       X                       X                       X                       X                       X           
           A  A                    A  C                    A  G                    A  T                    A  G                    A  T         
           T  T                    T  G                    T  C                    T  A                    T  T                    T  G         
            YG                      YG                      YG                      YG                      YG                      YG          
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'       
 -1.87 -1.93 -1.90 -4.00 -2.39 -2.45 -2.42 -4.51 -2.42 -2.48 -2.45 -4.55 -1.87 -1.93 -1.90 -4.00 -1.26 -1.32 -1.29 -3.39 -1.26 -1.32 -1.29 -3.39
 -4.22 -4.29 -6.32 -4.26 -3.80 -3.87 -5.90 -3.84 -4.55 -4.61 -6.64 -4.58 -3.93 -4.00 -6.03 -3.97 -2.64 -2.71 -4.74 -2.68 -2.26 -2.32 -4.35 -2.29
 -1.90 -3.90 -1.90 -1.13 -2.42 -4.42 -2.42 -1.64 -2.45 -4.45 -2.45 -1.68 -1.90 -3.90 -1.90 -1.13 -1.29 -3.29 -1.29 -0.52 -1.29 -3.29 -1.29 -0.52
 -3.35 -1.55 -1.84 -1.48 -2.16 -0.35 -0.64 -0.29 -4.48 -2.68 -2.97 -2.61 -3.00 -1.19 -1.48 -1.13 -3.77 -1.97 -2.26 -1.90 -1.45  0.35  0.06  0.42
                                                                                                                                                
            Y                       Y                       Y                       Y                       Y                       Y           
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'       
            X                       X                       X                       X                       X                       X           
           A  A                    A  C                    A  G                    A  T                    A  G                    A  T         
           T  T                    T  G                    T  C                    T  A                    T  T                    T  G         
            YT                      YT                      YT                      YT                      YT                      YT          
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'       
 -3.97 -4.03 -4.00 -6.09 -4.00 -4.06 -4.03 -6.13 -3.87 -3.93 -3.90 -6.00 -3.74 -3.80 -3.77 -5.87 -1.10 -1.16 -1.13 -3.22 -2.22 -2.29 -2.26 -4.35
 -2.00 -2.06 -4.09 -2.03 -2.55 -2.61 -4.64 -2.58 -2.55 -2.61 -4.64 -2.58 -2.00 -2.06 -4.09 -2.03 -1.42 -1.48 -3.51 -1.45 -1.42 -1.48 -3.51 -1.45
 -1.84 -3.84 -1.84 -1.06 -2.74 -4.74 -2.74 -1.97 -2.22 -4.22 -2.22 -1.45 -2.26 -4.26 -2.26 -1.48  0.42 -1.58  0.42  1.19 -0.13 -2.13 -0.13  0.64
 -3.77 -1.97 -2.26 -1.90 -4.32 -2.51 -2.81 -2.45 -4.32 -2.51 -2.81 -2.45 -3.77 -1.97 -2.26 -1.90 -3.26 -1.45 -1.74 -1.39 -3.26 -1.45 -1.74 -1.39
                                                                                                                                                
            Y                       Y                       Y                       Y                       Y                       Y           
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
     A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T        A    C    G    T   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------  
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'       
            X                       X                       X                       X                       X                       X           
           C  A                    C  C                    C  G                    C  T                    C  G                    C  T         
           G  T                    G  G                    G  C                    G  A                    G  T                    G  G         
            YA                      YA                      YA                      YA                      YA                      YA          
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'       
 -2.42 -2.51 -2.45 -4.06 -2.90 -3.00 -2.93 -4.55 -2.93 -3.03 -2.97 -4.58 -2.39 -2.48 -2.42 -4.03 -1.81 -1.90 -1.84 -3.45 -1.81 -1.90 -1.84 -3.45
 -2.55 -2.61 -3.80 -2.55 -3.10 -3.16 -4.35 -3.10 -3.13 -3.19 -4.38 -3.13 -2.55 -2.61 -3.80 -2.55 -2.00 -2.06 -3.26 -2.00 -2.00 -2.06 -3.26 -2.00
 -2.45 -4.51 -2.45 -2.61 -2.97 -5.03 -2.97 -3.13 -3.00 -5.06 -3.00 -3.16 -2.45 -4.51 -2.45 -2.61 -1.84 -3.90 -1.84 -2.00 -1.84 -3.90 -1.84 -2.00
 -5.77 -4.38 -4.09 -4.32 -5.93 -4.55 -4.26 -4.48 -6.06 -4.68 -4.38 -4.61 -6.00 -4.61 -4.32 -4.55 -3.48 -2.10 -1.81 -2.03 -3.80 -2.42 -2.13 -2.35