tloop.dhd

mfold

 Seq  Energy v3.1a                                     
 -----------                                      
 AAAAAT  5.0 
 AAAACT  0.7              
 AAACAT  1.0
 ACTTGT  0.0              
 AGAAAT -1.1              
 AGAGAT -1.1              
 AGATAT -1.5              
 AGCAAT -1.6              
 AGCGAT -1.1              
 AGCTTT  0.2              
 AGGAAT -1.1              
 AGGGAT -1.1              
 AGGGGT  5.0              
 AGTAAT -1.6
 AGTGAT -1.1              
 AGTTCT  0.8              
 ATTCGT -0.2              
 ATTTGT -0.0              
 ATTTTT -0.5              
 CAAAAG  5.0                
 CAAACG  0.7              
 CAACAG  1.0
 CAGCAG -0.6
 CAGTAG -0.6    
 CCTTGG -0.0              
 CGAAAG -1.1              
 CGAGAG -1.1              
 CGATAG -1.5                       
 CGCAAG -1.6              
 CGCGAG -1.1              
 CGCTTG  0.2              
 CGGAAG -1.1              
 CGGGAG -1.0              
 CGGGGG  5.0
 CGTAAG -1.6              
 CGTGAG -1.1              
 CGTTCG  0.8
 CTGCTG -1.0
 CTGTTG -1.0                   
 CTTCGG -0.2              
 CTTTGG -0.0              
 CTTTTG -0.5
 GAAAAC  5.0
 GAAACC  0.7              
 GAACAC  1.0              
 GCTTGC -0.0    
 GGAAAC -1.1              
 GGAGAC -1.1              
 GGATAC -1.6                        
 GGCAAC -1.6              
 GGCGAC -1.1              
 GGCTTC  0.2              
 GGGAAC -1.1              
 GGGGAC -1.1              
 GGGGGC  5.0              
 GGTAAC -1.6              
 GGTGAC -1.1
 GGTTCC  0.8              
 GTTCGC -0.2              
 GTTTGC -0.0              
 GTTTTC -0.5              
 GAAAAT  5.0                
 GAAACT  1.0              
 GAACAT  1.0              
 GCTTGT -0.0              
 GGAAAT -1.1              
 GGAGAT -1.1              
 GGATAT -1.6              
 GGCAAT -1.6              
 GGCGAT -1.1              
 GGCTTT -0.1 
 GGGAAT -1.1              
 GGGGAT -1.1              
 GGGGGT  5.0              
 GGTAAT -1.6              
 GGTGAT -1.1              
 GTATAT -0.5             
 GTTCGT -0.4              
 GTTTGT -0.4              
 GTTTTT -0.5              
 TAAAAA  5.0                
 TAAACA  0.7              
 TAACAA  1.0
 TCTTGA -0.0              
 TGAAAA -1.1              
 TGAGAA -1.1              
 TGATAA -1.6              
 TGCAAA -1.6              
 TGCGAA -1.1              
 TGCTTA  0.2              
 TGGAAA -1.1              
 TGGGAA -1.1              
 TGGGGA  5.0
 TGTAAA -1.6              
 TGTGAA -1.1              
 TGTTCA  0.8              
 TTTCGA -0.2              
 TTTTGA -0.0              
 TTTTTA -0.5              
 TAAAAG  5.0                
 TAAACG  1.0              
 TAACAG  1.0     
 TCTTGG -0.0
 TGAAAG -1.0              
 TGAGAG -1.0              
 TGATAG -1.5              
 TGCAAG -1.5              
 TGCGAG -1.0              
 TGCTTG -0.1              
 TGGAAG -1.0              
 TGGGAG -1.0              
 TGGGGG  5.0              
 TGTAAG -1.5              
 TGTGAG -1.0              
 TTTCGG -0.4              
 TTTTAG -1.0              
 TTTTGG -0.4              
 TTTTTG -0.5