asint1x2.dg

mfold

Data tables for asymmetric interior loops of size 3 
Free energies at 37 degrees for RNA 
Data arrangement: 
 
            Y 
    ------------------ 
(X)  A    C    G    U   
    ------------------ 
        5' --> 3' 
            X 
           A  A 
           U  U 
            YA 
        3' <-- 5' 
(A)  .    .    .    .    
(C)  .    .    .    .    
(G)  .    .    .    .    
(U)  .    .    .    .    
 
 
            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           A  A                    A  C                    A  G                    A  U                    A  G                    A  U 
           U  U                    U  G                    U  C                    U  A                    U  U                    U  G 
            YA                      YA                      YA                      YA                      YA                      YA 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  3.40  3.40  2.20  3.90  2.90  2.90  1.70  3.40  2.90  2.90  1.70  3.40  3.40  3.40  2.20  3.90  3.40  3.40  2.20  3.90  2.90  2.90  1.70  3.40 
  3.40  3.40  4.20  3.40  2.90  2.90  3.70  2.90  2.90  2.90  3.70  2.90  3.40  3.40  4.20  3.40  3.40  3.40  4.20  3.40  2.90  2.90  3.70  2.90 
  1.00  2.70  2.20  2.70  0.50  2.20  1.70  2.20  0.50  2.20  1.70  2.20  1.00  2.70  2.20  2.70  1.00  2.70  2.20  2.70  0.50  2.20  1.70  2.20 
  4.70  4.00  4.70  3.00  3.80  3.10  3.80  2.10  3.20  2.50  3.20  1.50  4.60  3.90  4.60  2.90  4.70  4.00  4.70  3.00  3.80  3.10  3.80  2.10 

            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           A  A                    A  C                    A  G                    A  U                    A  G                    A  U 
           U  U                    U  G                    U  C                    U  A                    U  U                    U  G 
            YC                      YC                      YC                      YC                      YC                      YC 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  3.40  3.40  2.20  3.90  2.90  2.90  1.70  3.40  2.90  2.90  1.70  3.40  3.40  3.40  2.20  3.90  3.40  3.40  2.20  3.90  2.90  2.90  1.70  3.40 
  3.40  3.40  4.20  3.40  2.90  2.90  3.70  2.90  2.90  2.90  3.70  2.90  3.40  3.40  4.20  3.40  3.40  3.40  4.20  3.40  2.90  2.90  3.70  2.90 
  3.40  5.10  4.60  5.10  2.60  4.30  3.80  4.30  2.20  3.90  3.40  3.90  3.00  4.70  4.20  4.70  3.40  5.10  4.60  5.10  2.60  4.30  3.80  4.30 
  4.10  3.40  4.10  2.40  3.60  2.90  3.60  1.90  3.60  2.90  3.60  1.90  4.10  3.40  4.10  2.40  4.10  3.40  4.10  2.40  3.60  2.90  3.60  1.90 

            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           A  A                    A  C                    A  G                    A  U                    A  G                    A  U 
           U  U                    U  G                    U  C                    U  A                    U  U                    U  G 
            YG                      YG                      YG                      YG                      YG                      YG 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  2.20  2.20  1.00  2.70  1.70  1.70  0.50  2.20  1.70  1.70  0.50  2.20  2.20  2.20  1.00  2.70  2.20  2.20  1.00  2.70  1.70  1.70  0.50  2.20 
  4.00  4.00  4.80  4.00  2.90  2.90  3.70  2.90  2.50  2.50  3.30  2.50  3.90  3.90  4.70  3.90  4.00  4.00  4.80  4.00  2.90  2.90  3.70  2.90 
  2.20  3.90  3.40  3.90  1.70  3.40  2.90  3.40  1.70  3.40  2.90  3.40  2.20  3.90  3.40  3.90  2.20  3.90  3.40  3.90  1.70  3.40  2.90  3.40 
  4.70  4.00  4.70  3.00  3.60  2.90  3.60  1.90  3.20  2.50  3.20  1.50  4.60  3.90  4.60  2.90  4.70  4.00  4.70  3.00  3.60  2.90  3.60  1.90 

            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           A  A                    A  C                    A  G                    A  U                    A  G                    A  U 
           U  U                    U  G                    U  C                    U  A                    U  U                    U  G 
            YU                      YU                      YU                      YU                      YU                      YU 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  4.60  4.60  3.40  5.10  3.60  3.60  2.40  4.10  3.00  3.00  1.80  3.50  4.10  4.10  2.90  4.60  4.60  4.60  3.40  5.10  3.60  3.60  2.40  4.10 
  3.40  3.40  4.20  3.40  2.90  2.90  3.70  2.90  2.90  2.90  3.70  2.90  3.40  3.40  4.20  3.40  3.40  3.40  4.20  3.40  2.90  2.90  3.70  2.90 
  3.40  5.10  4.60  5.10  2.40  4.10  3.60  4.10  1.80  3.50  3.00  3.50  2.90  4.60  4.10  4.60  3.40  5.10  4.60  5.10  2.40  4.10  3.60  4.10 
  3.10  2.40  3.10  1.40  2.60  1.90  2.60  0.90  2.60  1.90  2.60  0.90  3.10  2.40  3.10  1.40  3.10  2.40  3.10  1.40  2.60  1.90  2.60  0.90 

            Y                       Y                       Y                       Y                       Y                       Y 
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
     A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U        A    C    G    U   
    ------------------      ------------------      ------------------      ------------------      ------------------      ------------------ 
        5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3'               5' --> 3' 
            X                       X                       X                       X                       X                       X 
           C  A                    C  C                    C  G                    C  U                    C  G                    C  U 
           G  U                    G  G                    G  C                    G  A                    G  U                    G  G 
            YA                      YA                      YA                      YA                      YA                      YA 
        3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5'               3' <-- 5' 
  2.90  2.90  1.70  2.50  2.40  2.40  1.20  2.00  2.40  2.40  1.20  2.00  2.90  2.90  1.70  2.50  2.90  2.90  1.70  2.50  2.40  2.40  1.20  2.00 
  2.90  2.90  3.40  2.90  2.40  2.40  2.90  2.40  2.40  2.40  2.90  2.40  2.90  2.90  3.40  2.90  2.90  2.90  3.40  2.90  2.40  2.40  2.90  2.40 
  0.50  1.30  1.70  1.30  0.00  0.80  1.20  0.80  0.00  0.80  1.20  0.80  0.50  1.30  1.70  1.30  0.50  1.30  1.70  1.30  0.00  0.80  1.20  0.80 
  3.60  3.50  3.60  2.50  2.70  2.60  2.70  1.60  2.10  2.00  2.10  1.00  3.50  3.40  3.50  2.40  3.60  3.50  3.60  2.50  2.70  2.60  2.70  1.60 

            Y                       Y                       Y                       Y                       Y                       Y