📄 node16.html
字号:
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2 Final//EN"><!--Converted with LaTeX2HTML 98.1p1 release (March 2nd, 1998)originally by Nikos Drakos (nikos@cbl.leeds.ac.uk), CBLU, University of Leeds* revised and updated by: Marcus Hennecke, Ross Moore, Herb Swan* with significant contributions from: Jens Lippmann, Marek Rouchal, Martin Wilck and others --><HTML><HEAD><TITLE>EXAMPLE 3</TITLE><META NAME="description" CONTENT="EXAMPLE 3"><META NAME="keywords" CONTENT="FEBS98-html"><META NAME="resource-type" CONTENT="document"><META NAME="distribution" CONTENT="global"><META HTTP-EQUIV="Content-Type" CONTENT="text/html; charset=iso-8859-1"><LINK REL="STYLESHEET" HREF="FEBS98-html.css"><LINK REL="previous" HREF="node15.html"><LINK REL="up" HREF="node13.html"><LINK REL="next" HREF="node17.html"></HEAD><BODY BGCOLOR=#FFDEAD TEXT=#202020 LINK=#800000 ALINK=#ffff00 VLINK=#353976><!--Navigation Panel--><A NAME="tex2html238" HREF="node17.html"><IMG WIDTH="37" HEIGHT="24" ALIGN="BOTTOM" BORDER="0" ALT="next" SRC="img/next_motif.gif"></A> <A NAME="tex2html235" HREF="node13.html"><IMG WIDTH="26" HEIGHT="24" ALIGN="BOTTOM" BORDER="0" ALT="up" SRC="img/up_motif.gif"></A> <A NAME="tex2html231" HREF="node15.html"><IMG WIDTH="63" HEIGHT="24" ALIGN="BOTTOM" BORDER="0" ALT="previous" SRC="img/previous_motif.gif"></A> <A NAME="tex2html237" HREF="node1.html"><IMG WIDTH="65" HEIGHT="24" ALIGN="BOTTOM" BORDER="0" ALT="contents" SRC="img/contents_motif.gif"></A> <BR><B> Next:</B> <A NAME="tex2html239" HREF="node17.html">Future plans</A><B> Up:</B> <A NAME="tex2html236" HREF="node13.html">Sample foldings</A><B> Previous:</B> <A NAME="tex2html232" HREF="node15.html">EXAMPLE 2</A><BR><BR><!--End of Navigation Panel--><H2><A NAME="SECTION00083000000000000000"> E<SMALL>XAMPLE 3</SMALL></A></H2><P>Here we present some results from the folding of an RNA that isrelated to a Human adenovirus pre-terminal protein (U52533). This RNAexhibits both ``well-defined'' and ``poorly-defined'' folding regions,as shown in Figure <A HREF="node16.html#EX3P">17</A>. A total of 7 foldings were computedusing the default parameters.<P><BR><DIV ALIGN="CENTER"><A NAME="EX3P"> </A><A NAME="849"> </A><TABLE WIDTH="50%"><CAPTION><STRONG>Figure 17:</STRONG>The <I> energy dot plot</I> for the ``Example 3'' sequence, with <IMG WIDTH="29" HEIGHT="15" ALIGN="BOTTOM" BORDER="0" SRC="img6.gif" ALT="$\Delta G$">= -196.3 kcal/moleand <!-- MATH: $\Delta \Delta G$ --><IMG WIDTH="42" HEIGHT="15" ALIGN="BOTTOM" BORDER="0" SRC="img9.gif" ALT="$\Delta \Delta G$">= 9.8 kcal.mole. The region from bases 180 to 295 shows agreat deal of uncertainty in its folding. This may be interpreted as alarge ensemble of different foldings, or simply an ``unstructured''region. In contrast, the long stem pairing bases 160-178 with 316-298,respectively, is extremely well determined. Also well-determined is astem loop region that stretches from 37-81 and 322-365.</CAPTION><TR><TD><IMG WIDTH="516" HEIGHT="505" SRC="img126.gif" ALT="\begin{figure}\epsfig{file=Example3.ps,width=\textwidth}\end{figure}"></TD></TR></TABLE></DIV><BR><P><BR><HR><ADDRESS><TABLE><TR><TD><IMG SRC=img/shield16.gif HSPACE=20></TD><TD><I>Michael Zuker <BR>Institute for Biomedical Computing<BR>Washington University in St. Louis<BR>1998-12-05</I></TD></TR></TABLE></ADDRESS></BODY></HTML>⌨️ 快捷键说明
复制代码
Ctrl + C
搜索代码
Ctrl + F
全屏模式
F11
切换主题
Ctrl + Shift + D
显示快捷键
?
增大字号
Ctrl + =
减小字号
Ctrl + -