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Variable in class jbnc.util.<A HREF="./jbnc/util/BNCTester.html" title="class in jbnc.util">BNCTester</A><DD> <DT><A HREF="./jbnc/util/FrequencyCalc.html#dataset"><B>dataset</B></A> - Variable in class jbnc.util.<A HREF="./jbnc/util/FrequencyCalc.html" title="class in jbnc.util">FrequencyCalc</A><DD> <DT><A HREF="./jbnc/Classifier.html#debugMode"><B>debugMode</B></A> - Variable in class jbnc.<A HREF="./jbnc/Classifier.html" title="class in jbnc">Classifier</A><DD> <DT><A HREF="./jbnc/inducers/BayesianInducer.html#debugMode"><B>debugMode</B></A> - Variable in class jbnc.inducers.<A HREF="./jbnc/inducers/BayesianInducer.html" title="class in jbnc.inducers">BayesianInducer</A><DD> <DT><A HREF="./jbnc/operators/Operator.html#debugMode"><B>debugMode</B></A> - Variable in class jbnc.operators.<A HREF="./jbnc/operators/Operator.html" title="class in jbnc.operators">Operator</A><DD> <DT><A HREF="./jbnc/util/BNCTester.html#debugMode"><B>debugMode</B></A> - Variable in class jbnc.util.<A HREF="./jbnc/util/BNCTester.html" title="class in jbnc.util">BNCTester</A><DD> <DT><A HREF="./jbnc/dataset/Dataset.html#discardAllOfType(jbnc.dataset.AttributeType)"><B>discardAllOfType(AttributeType)</B></A> - Method in class jbnc.dataset.<A HREF="./jbnc/dataset/Dataset.html" title="class in jbnc.dataset">Dataset</A><DD>Discards all attributes that match the given type.<DT><A HREF="./jbnc/dataset/DatasetInt.html#discardAllOfType(jbnc.dataset.AttributeType)"><B>discardAllOfType(AttributeType)</B></A> - Method in class jbnc.dataset.<A HREF="./jbnc/dataset/DatasetInt.html" title="class in jbnc.dataset">DatasetInt</A><DD>Discards all attributes that match the given type.<DT><A HREF="./jbnc/dataset/Dataset.html#discardIncompleteCases"><B>discardIncompleteCases</B></A> - Variable in class jbnc.dataset.<A HREF="./jbnc/dataset/Dataset.html" title="class in jbnc.dataset">Dataset</A><DD>LOCAL<DT><A HREF="./jbnc/inducers/DiscardingBayesianInducer.html#discardNonDependent"><B>discardNonDependent</B></A> - Variable in class jbnc.inducers.<A HREF="./jbnc/inducers/DiscardingBayesianInducer.html" title="class in jbnc.inducers">DiscardingBayesianInducer</A><DD>Whether nodes that are not dependent on the class node should be dsiscarded from augmenting tree creation.<DT><A HREF="./jbnc/operators/SAN.html#discardNonDependent"><B>discardNonDependent</B></A> - Variable in class jbnc.operators.<A HREF="./jbnc/operators/SAN.html" title="class in jbnc.operators">SAN</A><DD>Whether nodes that are not dependent on the class node should be dsiscarded from augmenting tree creation.<DT><A HREF="./jbnc/discretize/EntropyDiscretizer.html#discretize(double)"><B>discretize(double)</B></A> - Method in class jbnc.discretize.<A HREF="./jbnc/discretize/EntropyDiscretizer.html" title="class in jbnc.discretize">EntropyDiscretizer</A><DD>Discretize single continous value.<DT><A HREF="./jbnc/graphs/Graph.html#dump()"><B>dump()</B></A> - Method in class jbnc.graphs.<A HREF="./jbnc/graphs/Graph.html" title="class in jbnc.graphs">Graph</A><DD>Description of the Method</DL><HR><A NAME="_E_"><!-- --></A><H2><B>E</B></H2><DL><DT><A HREF="./jbnc/graphs/Edge.html" title="class in jbnc.graphs"><B>Edge</B></A> - Class in <A HREF="./jbnc/graphs/package-summary.html">jbnc.graphs</A><DD>Description of the Class<DT><A HREF="./jbnc/graphs/EdgeWithWeight.html" title="class in jbnc.graphs"><B>EdgeWithWeight</B></A> - Class in <A HREF="./jbnc/graphs/package-summary.html">jbnc.graphs</A><DD>Description of the Class<DT><A HREF="./jbnc/graphs/EdgeWithWeight.html#EdgeWithWeight()"><B>EdgeWithWeight()</B></A> - Constructor for class jbnc.graphs.<A HREF="./jbnc/graphs/EdgeWithWeight.html" title="class in jbnc.graphs">EdgeWithWeight</A><DD> <DT><A HREF="./jbnc/graphs/EdgeWithWeight.html#EdgeWithWeight(jbnc.graphs.Vertex, jbnc.graphs.Vertex)"><B>EdgeWithWeight(Vertex, Vertex)</B></A> - Constructor for class jbnc.graphs.<A HREF="./jbnc/graphs/EdgeWithWeight.html" title="class in jbnc.graphs">EdgeWithWeight</A><DD> <DT><A HREF="./jbnc/graphs/EdgeWithWeight.html#EdgeWithWeight(jbnc.graphs.Vertex, jbnc.graphs.Vertex, double)"><B>EdgeWithWeight(Vertex, Vertex, double)</B></A> - Constructor for class jbnc.graphs.<A HREF="./jbnc/graphs/EdgeWithWeight.html" title="class in jbnc.graphs">EdgeWithWeight</A><DD> <DT><A HREF="./jbnc/discretize/EntropyDiscretizer.html" title="class in jbnc.discretize"><B>EntropyDiscretizer</B></A> - Class in <A HREF="./jbnc/discretize/package-summary.html">jbnc.discretize</A><DD>Implements entropy based discretisation algotithm by Fayyad and Irani.<DT><A HREF="./jbnc/discretize/EntropyDiscretizer.html#EntropyDiscretizer()"><B>EntropyDiscretizer()</B></A> - Constructor for class jbnc.discretize.<A HREF="./jbnc/discretize/EntropyDiscretizer.html" title="class in jbnc.discretize">EntropyDiscretizer</A><DD> <DT><A HREF="./jbnc/discretize/Case.html#equals(java.lang.Object)"><B>equals(Object)</B></A> - Method in class jbnc.discretize.<A HREF="./jbnc/discretize/Case.html" title="class in jbnc.discretize">Case</A><DD>Indicates whether some other object is "equal to" this one.<DT><A HREF="./jbnc/measures/QualityMeasure.html#evaluate(BayesianNetworks.BayesNet)"><B>evaluate(BayesNet)</B></A> - Method in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasure.html" title="class in jbnc.measures">QualityMeasure</A><DD>Calculate the quality measure for the given network and data set.<DT><A HREF="./jbnc/measures/QualityMeasureHGC.html#evaluate(BayesianNetworks.BayesNet)"><B>evaluate(BayesNet)</B></A> - Method in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasureHGC.html" title="class in jbnc.measures">QualityMeasureHGC</A><DD>Description of the Method<DT><A HREF="./jbnc/measures/QualityMeasureLC.html#evaluate(BayesianNetworks.BayesNet)"><B>evaluate(BayesNet)</B></A> - Method in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasureLC.html" title="class in jbnc.measures">QualityMeasureLC</A><DD>Description of the Method<DT><A HREF="./jbnc/measures/QualityMeasureLCV.html#evaluate(BayesianNetworks.BayesNet)"><B>evaluate(BayesNet)</B></A> - Method in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasureLCV.html" title="class in jbnc.measures">QualityMeasureLCV</A><DD>Description of the Method<DT><A HREF="./jbnc/measures/QualityMeasureLCV_LOO.html#evaluate(BayesianNetworks.BayesNet)"><B>evaluate(BayesNet)</B></A> - Method in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasureLCV_LOO.html" title="class in jbnc.measures">QualityMeasureLCV_LOO</A><DD>Description of the Method<DT><A HREF="./jbnc/measures/QualityMeasureSB.html#evaluate(BayesianNetworks.BayesNet)"><B>evaluate(BayesNet)</B></A> - Method in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasureSB.html" title="class in jbnc.measures">QualityMeasureSB</A><DD>Description of the Method</DL><HR><A NAME="_F_"><!-- --></A><H2><B>F</B></H2><DL><DT><A HREF="./jbnc/inducers/FANInducer.html" title="class in jbnc.inducers"><B>FANInducer</B></A> - Class in <A HREF="./jbnc/inducers/package-summary.html">jbnc.inducers</A><DD>Constructs Forest Augmented Naive Bayes classifier (FAN).<DT><A HREF="./jbnc/inducers/FANInducer.html#FANInducer()"><B>FANInducer()</B></A> - Constructor for class jbnc.inducers.<A HREF="./jbnc/inducers/FANInducer.html" title="class in jbnc.inducers">FANInducer</A><DD> <DT><A HREF="./jbnc/operators/ForestAugmenter.html" title="class in jbnc.operators"><B>ForestAugmenter</B></A> - Class in <A HREF="./jbnc/operators/package-summary.html">jbnc.operators</A><DD>Constructs Forest Augmented Naive Bayes classifier (FAN).<br> <br><DT><A HREF="./jbnc/operators/ForestAugmenter.html#ForestAugmenter()"><B>ForestAugmenter()</B></A> - Constructor for class jbnc.operators.<A HREF="./jbnc/operators/ForestAugmenter.html" title="class in jbnc.operators">ForestAugmenter</A><DD> <DT><A HREF="./jbnc/util/FrequencyCalc.html" title="class in jbnc.util"><B>FrequencyCalc</B></A> - Class in <A HREF="./jbnc/util/package-summary.html">jbnc.util</A><DD>Calculate variable frequencies given a dataset.<DT><A HREF="./jbnc/util/FrequencyCalc.html#FrequencyCalc(jbnc.dataset.DatasetInt)"><B>FrequencyCalc(DatasetInt)</B></A> - Constructor for class jbnc.util.<A HREF="./jbnc/util/FrequencyCalc.html" title="class in jbnc.util">FrequencyCalc</A><DD>Constructor for the FrequencyCalc object<DT><A HREF="./jbnc/util/FrequencyTable.html" title="class in jbnc.util"><B>FrequencyTable</B></A> - Class in <A HREF="./jbnc/util/package-summary.html">jbnc.util</A><DD>Description of the Class<DT><A HREF="./jbnc/util/FrequencyTable.html#FrequencyTable(BayesianNetworks.BayesNet)"><B>FrequencyTable(BayesNet)</B></A> - Constructor for class jbnc.util.<A HREF="./jbnc/util/FrequencyTable.html" title="class in jbnc.util">FrequencyTable</A><DD>Constructor for the FrequencyTable object<DT><A HREF="./jbnc/measures/QualityMeasureLCV.html#fc"><B>fc</B></A> - Variable in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasureLCV.html" title="class in jbnc.measures">QualityMeasureLCV</A><DD> <DT><A HREF="./jbnc/Classifier.html#fileNameStem"><B>fileNameStem</B></A> - Variable in class jbnc.<A HREF="./jbnc/Classifier.html" title="class in jbnc">Classifier</A><DD> <DT><A HREF="./jbnc/graphs/DisjointSets.html#findSet(java.lang.Object)"><B>findSet(Object)</B></A> - Method in class jbnc.graphs.<A HREF="./jbnc/graphs/DisjointSets.html" title="class in jbnc.graphs">DisjointSets</A><DD>Returns a pointer to the representative of the (unique) set containing <i> x</i> .<DT><A HREF="./jbnc/util/FrequencyCalc.html#freqX"><B>freqX</B></A> - Variable in class jbnc.util.<A HREF="./jbnc/util/FrequencyCalc.html" title="class in jbnc.util">FrequencyCalc</A><DD>Frequency of variable values X.<DT><A HREF="./jbnc/util/FrequencyCalc.html#freqXY"><B>freqXY</B></A> - Variable in class jbnc.util.<A HREF="./jbnc/util/FrequencyCalc.html" title="class in jbnc.util">FrequencyCalc</A><DD>Joint frequency of variable values X and Y.<DT><A HREF="./jbnc/util/FrequencyCalc.html#freqXYZ"><B>freqXYZ</B></A> - Variable in class jbnc.util.<A HREF="./jbnc/util/FrequencyCalc.html" title="class in jbnc.util">FrequencyCalc</A><DD>Joint frequency of variable values X, Y and Z.<DT><A HREF="./jbnc/util/FrequencyTable.html#frequencyNodes"><B>frequencyNodes</B></A> - Variable in class jbnc.util.<A HREF="./jbnc/util/FrequencyTable.html" title="class in jbnc.util">FrequencyTable</A><DD> </DL><HR><A NAME="_G_"><!-- --></A><H2><B>G</B></H2><DL><DT><A HREF="./jbnc/graphs/Graph.html" title="class in jbnc.graphs"><B>Graph</B></A> - Class in <A HREF="./jbnc/graphs/package-summary.html">jbnc.graphs</A><DD>Description of the Class<DT><A HREF="./jbnc/graphs/Graph.html#Graph()"><B>Graph()</B></A> - Constructor for class jbnc.graphs.<A HREF="./jbnc/graphs/Graph.html" title="class in jbnc.graphs">Graph</A><DD> <DT><A HREF="./jbnc/util/BNTools.html#gammaLn(double)"><B>gammaLn(double)</B></A> - Static method in class jbnc.util.<A HREF="./jbnc/util/BNTools.html" title="class in jbnc.util">BNTools</A><DD>Returns the value ln[ gamma(xx)] for xx > 0 Implementation based on W.H.<DT><A HREF="./jbnc/util/CVGenerator.html#generateSets(int, java.util.Vector[], java.util.Vector[])"><B>generateSets(int, Vector[], Vector[])</B></A> - Method in class jbnc.util.<A HREF="./jbnc/util/CVGenerator.html" title="class in jbnc.util">CVGenerator</A><DD> <DT><A HREF="./jbnc/util/CondMutualInfo.html#get(boolean[], boolean, double)"><B>get(boolean[], boolean, double)</B></A> - Method in class jbnc.util.<A HREF="./jbnc/util/CondMutualInfo.html" title="class in jbnc.util">CondMutualInfo</A><DD>Return conditional mutual information matrix I.<DT><A HREF="./jbnc/util/BNTools.html#getASBMParamComponent(BayesianNetworks.BayesNet, jbnc.dataset.DatasetInt, boolean, double)"><B>getASBMParamComponent(BayesNet, DatasetInt, boolean, double)</B></A> - Static method in class jbnc.util.<A HREF="./jbnc/util/BNTools.html" title="class in jbnc.util">BNTools</A><DD>Return network parameters component of the asymptotic standard Bayesian measure (ASBM).<DT><A HREF="./jbnc/util/BNCTester.Result.html#getAccuracy()"><B>getAccuracy()</B></A> - Method in class jbnc.util.<A HREF="./jbnc/util/BNCTester.Result.html" title="class in jbnc.util">BNCTester.Result</A><DD> <DT><A HREF="./jbnc/measures/QualityMeasure.html#getAlphaK()"><B>getAlphaK()</B></A> - Method in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasure.html" title="class in jbnc.measures">QualityMeasure</A><DD>Gets value of the prior.<DT><A HREF="./jbnc/measures/QualityMeasureLCV.html#getCVFolds()"><B>getCVFolds()</B></A> - Method in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasureLCV.html" title="class in jbnc.measures">QualityMeasureLCV</A><DD>Gets the number of cross-validation folds.<DT><A HREF="./jbnc/measures/QualityMeasureLCV.html#getCVTimes()"><B>getCVTimes()</B></A> - Method in class jbnc.measures.<A HREF="./jbnc/measures/QualityMeasureLCV.html" title="class in jbnc.measures">QualityMeasureLCV</A><DD>Gets the number of times the cross validation is repeated (averaged).<DT><A HREF="./jbnc/graphs/Graph.html#getChildrenOf(jbnc.graphs.Vertex)"><B>getChildrenOf(Vertex)</B></A> - Method in class jbnc.graphs.<A HREF="./jbnc/graphs/Graph.html" title="class in jbnc.graphs">Graph</A><DD>Return all children nodes of the given parent node.<DT><A HREF="./jbnc/graphs/Graph.html#getChildrenOf(int)"><B>getChildrenOf(int)</B></A> - Method in class jbnc.graphs.<A HREF="./jbnc/graphs/Graph.html" title="class in jbnc.graphs">Graph</A><DD>Return all children nodes of the parent node with given index.
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