📄 orderedcrossover.java
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//-----------------------------------------------------------------------------
// Traveller -- A Java Application and Applet
//
// A Genetic Algorithm for Solving the Travelling Salesman Problem
//
// OrderedCrosover.java
// version 1.1.0
//
// Copyright 2000-2001 Scott Robert Ladd. All rights reserved.
//
// For more information about this program, contact:
//
// Scott Robert Ladd
// scott@coyotegulch.com
// http://www.coyotegulch.com
//
//-----------------------------------------------------------------------------
// This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU General Public License for more details.
//
// You should have received a copy of the GNU General Public License
// along with this program; if not, write to the
//
// Free Software Foundation, Inc.
// 59 Temple Place - Suite 330
// Boston, MA 02111-1307, USA.
//-----------------------------------------------------------------------------
/*
** This code was extensively modified by Kent Paul Dolan. See
** accompanying file TravellerDoc.html for status of the modifications
** for your use.
*/
package com.well.www.user.xanthian.java.genetic.reproducers.sexual;
import com.coyotegulch.genetic.*;
import com.well.www.user.xanthian.java.genetic.*;
import com.well.www.user.xanthian.java.tools.*;
import com.well.www.user.xanthian.java.ui.*;
public class OrderedCrossover
implements SexualReproducer
{
private static boolean DB = false;
private static boolean VDB = false;
private static VisualDebugger m_vdb = null;
public Chromosome reproduce(Chromosome father, Chromosome mother)
{
try
{
/*
** Debugging hook abbreviation. During development, turn on debugging
** just for this class by setting this variable to true, here. When the
** code is stable, set it to false here, and control debugging from the
** checkbox controls panel, instead. This variable is global to this
** class, so it controls debugging thoughout the class when set here at
** the top of the entry method for the class.
*/
DB = false;
if (CheckBoxControls.getState(CheckBoxControls.CBC_DEBUG_PRINTOUTS))
{
DB = true;
System.out.println
(
"Entering OrderedCrossover.reproduce()"
);
}
if
(
(father instanceof TravellerChromosome)
&&
(mother instanceof TravellerChromosome)
)
{
/*
** Give local names with extended types to the two parent genome handles
** passed in as parameters of unextended types.
*/
TravellerChromosome f = (TravellerChromosome)father;
TravellerChromosome m = (TravellerChromosome)mother;
Chromosome child = (Chromosome) algorithm( f, m );
child.setOriginator( "OrderedCrossover" );
child.checkValidity();
return child;
}
else
{
throw m_errIncompatible;
}
}
catch (Exception e)
{
System.err.println
(
"OrderedCrossover.reproduce() threw!"
);
}
/*
** This code should never be reached, it is just here to pacify javac
** about the return statement being stuck in a try context above.
*/
return father;
}
private TravellerChromosome algorithm( TravellerChromosome f, TravellerChromosome m )
{
VDB = false;
if (CheckBoxControls.getState(CheckBoxControls.CBC_DEBUG_VISUAL_WINDOWS))
{
VDB = true;
}
if (VDB)
{
if ( m_vdb == null )
{
m_vdb = new VisualDebugger( "OrderedCrossover" );
}
}
else
{
if ( m_vdb != null )
{
m_vdb.closeWindow();
m_vdb = null;
}
}
if (VDB) { m_vdb.toFront(); }
MersenneTwister mt = MersenneTwister.getTwister();
int genomeLength = f.getNumCities();
f.canonicalize();
m.canonicalize();
if (DB)
{
System.out.println( "\r\n====================\r\n" );
System.out.println("father: " + f.toString());
System.out.println("mother: " + m.toString());
}
if (VDB) { m_vdb.setup( f, m ); }
TravellerChromosome fatherOffspring = new TravellerChromosome(f);
TravellerChromosome motherOffspring = new TravellerChromosome(m);
/*
** FIXME Needed for debugging only!
**
*/
fatherOffspring.invalidateCities();
motherOffspring.invalidateCities();
/*
** It works much better for subsequent calculations to work with
** starting point and segment length, rather than starting point and
** ending point, so I replaced Scott's logic here. It was rife with
** artifacts from ignoring the ring essense of the Traveller permutation
** chromosome, and doing so actually made his code more complicated in
** some parts.
*/
/*
** Randomly pick a crossover segment length. At least two cities should
** escape this segment, or doing the crossover is pointless. At least
** two cities should be in it, because swapping less than an edge
** doesn't do any more than the Move heuristic can already do. Of
** course, if the genome length is three, we are probably wasting time
** in all cases.
*/
int segmentLength = 2 + mt.nextInt(genomeLength - 3);
/*
** Randomly pick the beginning of the crossover segment in the father.
*/
int fatherStart = mt.nextInt(genomeLength);
/*
** Randomly pick an offset from there for the start of the crossover
** segment in the mother.
*/
int motherOffset = mt.nextInt(genomeLength);
/*
** Choose whether to traverse the mother genome in a reversed or
** forward direction.
*/
boolean reverseMother = mt.nextBoolean();
if (DB)
{
System.out.println
(
"\r\nsegmentLength/fatherStart/motherOffset/reverseMother: "
+ segmentLength
+ "/"
+ fatherStart
+ "/"
+ motherOffset
+ "/"
+ reverseMother
+ "\r\nadjusted father: "
+ f.toString( fatherStart )
+ "\r\nadjusted mother: "
+ m.toString( motherOffset + fatherStart, reverseMother )
);
}
/*
** OK, we know how far we want to go, and in which direction, for both
** mother and father genomes, and we want to copy stuff from parent to
** child to the front if it is in the opposite parent's crossover
** segment, and after the front stuff, if it is not. Choose some
** walking shoes.
*/
/*
** WARNING This isn't exactly the same as Scott's documentation shows
** for ordered crossover, which would take three pointers and more
** findCity() calls to do correctly, but it adheres to the spirit.
** Scott's method copies all the cities occurring in the opposite
** parent's genome to the left, then all the cities not yet copied from
** the current parent's genome to the right, then fills in the middle
** with those that remain, though that's not at all how he explained it,
** since he forgot to discuss that the cities that could occur in
** _both_ parent's crossover segments might mean copying less than all
** of ones own crossover segment to the end, and also he failed to take
** advantage of the genome's invariance under ring rotation to slide the
** crossover segments to the left to start. This version of the routine
** just copies the first set to the left and the other two sets to the
** right without trying to keep them distinguished. I think, in doing
** so, that it preserves more of the original order than Scott's
** approach, though I'd hate to have to defend that supposition without
** a lot of preparation time.
*/
/*
** Where the crossover city copying starts, both "from" and "to", in
** relation to the starting points.
*/
int mcx_to = 0;
int fcx_to = 0;
int mcx_from = 0;
int fcx_from = 0;
/*
** Where the non-crossover city copying starts, leaving room for the
** crossover cities, exactly segmentLength worth of room, in fact.
*/
int mcnx = segmentLength;
int fcnx = segmentLength;
/*
** Take a walk.
*/
for (int i = 0; i < genomeLength; i++)
{
int fatherCity = f.getCity(i + fatherStart);
int motherCity = m.getCity(i, motherOffset + fatherStart, reverseMother);
int fatherCityIndexInMother =
m.findCity( fatherCity , motherOffset, reverseMother );
int motherCityIndexInFather = f.findCity( motherCity );
if (DB)
{
System.out.println
(
"\r\n"
+ "fatherCity/fatherCityIndexInMother/m.indexIsInSegment: "
+ fatherCity
+ "/"
+ fatherCityIndexInMother
+ "/"
+ m.indexIsInSegment
(
fatherCityIndexInMother,
fatherStart,
segmentLength,
motherOffset,
reverseMother
)
);
System.out.println
(
"motherCity/motherCityIndexInFather/f.indexIsInSegment: "
+ motherCity
+ "/"
+ motherCityIndexInFather
+ "/"
+ f.indexIsInSegment
(
motherCityIndexInFather,
fatherStart,
segmentLength,
0,
false
)
);
}
/*
** FIXME THIS IS MADDENINGLY WRONG! I'm copying the correct codons to
** the swap region, but I'm copying them in the recipient parent order
** instead of in the donor parent order!
*/
if
(
m.indexIsInSegment
(
fatherCityIndexInMother,
fatherStart,
segmentLength,
motherOffset,
reverseMother
)
)
{
/*
** To get the correct crossover order (that of the mother) in the
** fatherOffspring, we don't treat the crossover-incoming city
** encountered in the father as a literal city to copy (they will be
** encountered in arbitrary order in the father relative to their order
** in the mother), but only as a notification that it is time to copy
** the next crossover city from the mother to the fatherOffspring
** crossover area.
*/
fatherOffspring.setCity
(
fcx_to,
m.getCity( mcx_from, motherOffset + fatherStart, reverseMother )
);
fcx_to++;
mcx_from++;
}
else
{
fatherOffspring.setCity(fcnx, fatherCity);
fcnx++;
}
if
(
f.indexIsInSegment
(
motherCityIndexInFather,
fatherStart,
segmentLength,
0,
false
)
)
{
/*
** Same considerations as above for the fatherOffspring, but with the
** genders of all the players reversed.
*/
motherOffspring.setCity(mcx_to, f.getCity( fcx_from + fatherStart ) );
mcx_to++;
fcx_from++;
}
else
{
motherOffspring.setCity(mcnx, motherCity);
mcnx++;
}
if (DB)
{
System.out.println
(
"i/fcx_to/fcx_from/fcnx//mcx_to/mcx_from/mcnx: "
+ i + "/"
+ fcx_to + "/"
+ fcx_from + "/"
+ fcnx + "//"
+ mcx_to + "/"
+ mcx_from + "/"
+ mcnx
);
System.out.println("motherOffspring:" + motherOffspring.toString());
System.out.println("fatherOffspring:" + fatherOffspring.toString());
}
}
/*
** POLICY We choose to murder weaklings in the nest in the interests of
** having each genome compete for only its own slot in the population,
** in the simplest case. The previous implementation let some genomes
** get removed from the population with no chance to breed or compete,
** by overwriting their slots (and thus opportunities) with multiple
** offspring of crossovers, and arguably discarded fitness from the
** population that way.
*/
TravellerChromosome child = null;
if (VDB) { m_vdb.step( fatherOffspring ); }
if (VDB) { m_vdb.step( motherOffspring ); }
if
(
(
Population.areMinimizing()
&&
(motherOffspring.testFitness() < fatherOffspring.testFitness())
)
||
(
(!Population.areMinimizing())
&&
(motherOffspring.testFitness() > fatherOffspring.testFitness())
)
)
{
child = motherOffspring;
}
else
{
child = fatherOffspring;
}
if (VDB) { m_vdb.done( f, m, child ); }
return child;
}
}
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