📄 picksle.m
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function picksout=picksle(arg1,arg2,arg3,arg4,arg5)
%***************
%*** PICKSLE ***
%***************
%
% picksle(transfer,seisstruct);
% picksle(transfer,seisstruct,masteraxes);
% picksle(transfer,seisstruct,masteraxes,preferances);
%
% PICKSLE is a new picking routine that allows users to make picks across
% seismic sections and interpolate between
%
% PICKSLE cleans up after it has calculated the initial picks and erases
% them from the axis. The picks information is passed using the 'transfer'
% argument which executes upon the final calculation. This transfer
% should be a routine in the users program which calls picksle and have the
% following command 'picksout=picksle('EXPORT')' to access the picks
% information that was calculated.
%
% The seisstruct is set up in a field the following way.
% SEIS : (2D Array of seismic data)
% T : (Depth or Time) - optional
% X : (Distance) - optional
%
% masteraxes - The specific axes where calculations will take place
% default - gca
%
% The preferance argument has several variables that can be changed to
% allow for greater flexibility in automatic picking. The variables are
% descibed below. It should be noted that not all properties need be
% present for this program to work.
%
% {'hmsg' 'nodetolerance' 'sampleadd' 'showprogress' 'percenttolerance'
% 'lockto' 'askdetail'
%
% 'hmsg' : a handle where messages from pickles can be sent to relay
% information to the user (default = empty)
%
% 'nodetolerance' : Allows the user to control how many pics are made. The
% highter the number, the less pics. 1 will allow for one pic per trace
% (default = 5)
%
% 'sampleadd' : This controls samples size of the windowed area that the is
% taken of the initial clicked trace. (defaul = 100)
%
% 'showprogress' : This is more for debugging purposes to show the user
% where the cross correlation scanning is happing on the image
% (default = "Show Progress", leave empty to not show progress)
%
% 'percenttolerance' : percentage crosscorelation that picksle will check
% for and accept when searching for nodes, in decmil form
%
% 'lockto' : can be set to 'open', 'peak', 'trough', 'zerocross+',
% 'zerocross-'
% (default = open)
%
% 'askdetail' : This argument allows the user to shut on or off the figure
% that allows adjustment in click location and window size.
% (default = 'on' )
%
% Christopher Harrison, 2004
%
% NOTE: It is illegal for you to use this software for a purpose other
% than non-profit education or research UNLESS you are employed by a CREWES
% Project sponsor. By using this software, you are agreeing to the terms
% detailed in this software's Matlab source file.
% BEGIN TERMS OF USE LICENSE
%
% This SOFTWARE is maintained by the CREWES Project at the Department
% of Geology and Geophysics of the University of Calgary, Calgary,
% Alberta, Canada. The copyright and ownership is jointly held by
% its author (identified above) and the CREWES Project. The CREWES
% project may be contacted via email at: crewes@geo.ucalgary.ca
%
% The term 'SOFTWARE' refers to the Matlab source code, translations to
% any other computer language, or object code
%
% Terms of use of this SOFTWARE
%
% 1) Use of this SOFTWARE by any for-profit commercial organization is
% expressly forbidden unless said organization is a CREWES Project
% Sponsor.
%
% 2) A CREWES Project sponsor may use this SOFTWARE under the terms of the
% CREWES Project Sponsorship agreement.
%
% 3) A student or employee of a non-profit educational institution may
% use this SOFTWARE subject to the following terms and conditions:
% - this SOFTWARE is for teaching or research purposes only.
% - this SOFTWARE may be distributed to other students or researchers
% provided that these license terms are included.
% - reselling the SOFTWARE, or including it or any portion of it, in any
% software that will be resold is expressly forbidden.
% - transfering the SOFTWARE in any form to a commercial firm or any
% other for-profit organization is expressly forbidden.
%
% END TERMS OF USE LICENSE
if(nargin<=0|nargin>=5)
stringinfo={'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
elseif(nargin==1)
if(~ischar(arg1))
stringinfo={'Input data not set up properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
else
checkstr=findstr('bdownbmotionbupEXPORT',arg1);
if(isempty(checkstr))
stringinfo={'Input data not set up properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
end
switch arg1
case 'bdown'
PLE_buttondown
case 'bmotion'
PLE_motion
case 'bup'
PLE_up
case 'EXPORT'
%--- Getting Data ---
pref=get(gca,'userdata');
if(~isstruct(pref))
% something is wrong if this is not a structure
picksout=[];
return
end
% doing a last check, just in case something has gone wrong
fnms=fieldnames(pref);
dat=[];
for ii=1:length(fnms)
if(strcmp(fnms{ii},'holddat'))
dat=getfield(pref,'holddat');
break
end
end
%----------
picksout=dat;
end
return
end
elseif(nargin==2)
% Two arguments mean user has passed seis structure and gca
trans=arg1;
seisstruct=arg2;
masteraxes=gca;
preferances=[];
elseif(nargin==3)
% seis structure and gca, and location of th pulldownmenu
trans=arg1;
seisstruct=arg2;
masteraxes=arg3;
preferances=[];
elseif(nargin==4)
trans=arg1;
seisstruct=arg2;
masteraxes=arg3;
preferances=arg4;
elseif(nargin==5)
return
end
% Checking first if figure and axes are actually right
if(~ishandle(masteraxes))
stringinfo={'Axes handle has not been choosen properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
elseif(~strcmp(get(masteraxes,'type'),'axes'))
stringinfo={'Axes handle has not been choosen properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
end
masterfig=get(gca,'parent');
% eventually there will be an "Initial Picks"
initialpicks=[];
% checking to make sure seis data is in structure form
if(~isstruct(seisstruct))
stringinfo={'seisstruct has not been set up properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
end
% checking to see that seis struct has the proper components
fnms=fieldnames(seisstruct);
checknms={'SEIS' 'T' 'X'}; % there will evenutally be a "y" for 3D
SEIS=[];
T=[];
X=[];
for ii=1:size(checknms,2)
checked=[];
for jj=1:size(fnms,1)
if(strcmp(lower(checknms{ii}),lower(fnms{jj})))
% just in case
checked='Check';
checknms{ii}=getfield(seisstruct,(fnms{jj}));
break
end
end
if(isempty(checked)&strcmp(lower(checknms{ii}),lower('SEIS')))
stringinfo={'seisstruct has not been set up properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
end
end
SEIS=checknms{1};
T=checknms{2};
X=checknms{3};
if(isempty(SEIS)||isstr(SEIS))
stringinfo={'Make sure your SEIS array is not empty.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
end
if(isempty(T)||isstr(T))
T=[1:1:size(SEIS,1)];
end
if(isempty(X)||isstr(X))
X=[1:1:size(SEIS,2)];
end
seiss.SEIS=SEIS;
seiss.T=T;
seiss.X=X;
seisstruct=seiss;
% Check seistruct to make sure proper matrix lengths have been creat
if(isempty(T))
T=[0:1:size(SEIS,1)-1]';
seisstruct.T=T;
elseif(size(SEIS,1)~=length(T))
stringinfo={'seisstruct has not been set up properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
end
if(isempty(X))
X=[0:1:size(SEIS,2)-1];
seisstruct.X=X;
elseif(size(SEIS,2)~=length(X))
stringinfo={'seisstruct has not been set up properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
else
if(X(1)==X(end))
end
end
pref.seisstruct=seisstruct;
pref.axes=masteraxes;
pref.transfer=trans;
pref.holddat=[]; % This helps with the transfer of data.
if(~isempty(preferances))
% checking preferances
if(~isstruct(preferances))
stringinfo={'Your preferances are not set up properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
end
% checking to make sure that user has set up the preferance file right
% NOTE, when adding new prefereance to program, you must also add them
% to the "checkfields" prefernce field.
hmsg='nothing yet';
nodetolerance='nothing yet';
sampleadd='nothing yet';
showprogress='Showing Progress';
percenttolerance='nothing yet';
lockto='open';
askdetail='on';
checkfield={'hmsg' 'nodetolerance' 'sampleadd' 'showprogress' 'percenttolerance' 'lockto' 'askdetail'};
fnames=fieldnames(preferances);
% checking to make sure the properties that have been included in the
% preferances correspond to know preferences
checked='no';
for ii=1:size(fnames)
for jj=1:size(checkfield)
if(strcmpi(fnames(ii),checkfield(jj)))
% This allows the user to input only one propertie
checked='yes';
break
end
end
if(~strcmpi(checked,'yes'))
stringinfo={'Your preferances are not set up properly.',...
'Please see picksle help for details in proper use'};
helpdlg(stringinfo,'Check PICKSLE help file');
return
end
end
checkfields={'hmsg' 'nodetolerance' 'sampleadd' 'showprogress' 'percenttolerance',...
'axes' 'transfer' 'holddat' 'lockto' 'askdetail'};
% doing a last check of the preferences
if(~ishandle(hmsg)) hmsg=[]; end
if(~isnumeric(nodetolerance)) nodetolerance=1; elseif(nodetolerance<=1) nodetolerance=1; end
if(~isnumeric(sampleadd)) sampleadd=100; end
if(~isnumeric(percenttolerance)) percenttolerance=.2; end
checkpreset={{'open','peak','trough','zerocross','zerocross+','zerocross-'} {'on' 'off'}};
checkinput={lower(lockto) lower(askdetail)};
checking={[] []};
checkerror={'Locking for advanced picking has not been set up correctly',...
'Detail has not been set up properly'};
for ii=1:size(checkpreset,2)
cpreset=checkpreset{ii};
for jj=1:size(cpreset,2)
if(strcmpi(checkinput{ii},cpreset{jj}))
checking{ii}='Checked';
break
end
end
if(isempty(checking{ii}))
stringinfo=checkerror{ii};
helpdlg(stringinfo,'Check PICKSLE help file');
return
end
end
pref.showprogress=showprogress; % empty means no show progress
pref.sampleadd=sampleadd;
pref.percenttolerance=percenttolerance;
pref.nodetolerance=nodetolerance;
pref.hmsg=hmsg;
pref.lockto=checkinput{1};
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