license

fastDNAml is an attempt to solve the same problem as DNAML, but to do so faster and using less memo

fastDNAml, a program for estimation of phylogenetic trees from sequences.
Copyright (C) 1998, 1999, 2000 by Gary J. Olsen

This program is free software; you may redistribute it and/or modify it
under the terms of the GNU General Public License as published by the Free
Software Foundation; either version 2 of the License, or (at your option)
any later version.

This program is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
for more details.

You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.

For any other enquiries write to Gary J. Olsen, Department of Microbiology,
University of Illinois, Urbana, IL  61801, USA

Or send E-mail to [e-mail]


fastDNAml is based in part on the program dnaml by Joseph Felsenstein.

Copyright notice from dnaml:

   version 3.3. (c) Copyright 1986, 1990 by the University of Washington
   and Joseph Felsenstein.  Written by Joseph Felsenstein.  Permission is
   granted to copy and use this program provided no fee is charged for it
   and provided that this copyright notice is not removed.


When publishing work that based on results from fastDNAml please cite:

   Felsenstein, J.  1981.  Evolutionary trees from DNA sequences:
   A maximum likelihood approach.  J. Mol. Evol. 17: 368-376.

and

   Olsen, G. J., Matsuda, H., Hagstrom, R., and Overbeek, R.  1994.
   fastDNAml:  A tool for construction of phylogenetic trees of DNA
   sequences using maximum likelihood.  Comput. Appl. Biosci. 10: 41-48.