makefile.in

一个通用的隐性马尔可夫C代码库 开发环境:C语言 简要说明:这是一个通用的隐性马尔可夫C代码库

# Makefile.in generated by automake 1.7.2 from Makefile.am.
# @configure_input@

# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
# Free Software Foundation, Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.

# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
# PARTICULAR PURPOSE.

@SET_MAKE@

#  author       : Achim Gaedke
#  filename     : ghmm/tests/Makefile.am
#  created      : DATE: April 2001
#  $Id: Makefile.am,v 1.26 2003/11/11 19:55:55 wasinee Exp $
#
# Copyright (C) 1998-2001, ZAIK/ZPR, Universit鋞 zu K鰈n
# 
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
# 
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
# 
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
# 

srcdir = @srcdir@
top_srcdir = @top_srcdir@
VPATH = @srcdir@
pkgdatadir = $(datadir)/@PACKAGE@
pkglibdir = $(libdir)/@PACKAGE@
pkgincludedir = $(includedir)/@PACKAGE@
top_builddir = ..

am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
INSTALL = @INSTALL@
install_sh_DATA = $(install_sh) -c -m 644
install_sh_PROGRAM = $(install_sh) -c
install_sh_SCRIPT = $(install_sh) -c
INSTALL_HEADER = $(INSTALL_DATA)
transform = $(program_transform_name)
NORMAL_INSTALL = :
PRE_INSTALL = :
POST_INSTALL = :
NORMAL_UNINSTALL = :
PRE_UNINSTALL = :
POST_UNINSTALL = :
host_triplet = @host@
ACLOCAL = @ACLOCAL@
AMDEP_FALSE = @AMDEP_FALSE@
AMDEP_TRUE = @AMDEP_TRUE@
AMTAR = @AMTAR@
AUTOCONF = @AUTOCONF@
AUTOHEADER = @AUTOHEADER@
AUTOMAKE = @AUTOMAKE@
AWK = @AWK@
CC = @CC@
CCDEPMODE = @CCDEPMODE@
CFLAGS = @CFLAGS@
CPP = @CPP@
CPPFLAGS = @CPPFLAGS@
CXX = @CXX@
CXXCPP = @CXXCPP@
CXXDEPMODE = @CXXDEPMODE@
CXXFLAGS = @CXXFLAGS@
CYGPATH_W = @CYGPATH_W@
DEFS = @DEFS@
DEPDIR = @DEPDIR@
DOCXX = @DOCXX@
DVIPS = @DVIPS@
ECHO = @ECHO@
ECHO_C = @ECHO_C@
ECHO_N = @ECHO_N@
ECHO_T = @ECHO_T@
EGREP = @EGREP@
EXEEXT = @EXEEXT@
EXPECT_FOR_DEJAGNU = @EXPECT_FOR_DEJAGNU@
GHMM_VERSION_AGE = @GHMM_VERSION_AGE@
GHMM_VERSION_CURRENT = @GHMM_VERSION_CURRENT@
GHMM_VERSION_REVISION = @GHMM_VERSION_REVISION@
GSL_CFLAGS = @GSL_CFLAGS@
GSL_CONFIG = @GSL_CONFIG@
GSL_LIBS = @GSL_LIBS@
INSTALL_DATA = @INSTALL_DATA@
INSTALL_PROGRAM = @INSTALL_PROGRAM@
INSTALL_SCRIPT = @INSTALL_SCRIPT@
INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@
LATEX = @LATEX@
LDFLAGS = @LDFLAGS@
LIBOBJS = @LIBOBJS@
LIBS = @LIBS@
LIBTOOL = @LIBTOOL@
LN_S = @LN_S@
LTLIBOBJS = @LTLIBOBJS@
MAKEINFO = @MAKEINFO@
OBJEXT = @OBJEXT@
PACKAGE = @PACKAGE@
PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
PACKAGE_NAME = @PACKAGE_NAME@
PACKAGE_STRING = @PACKAGE_STRING@
PACKAGE_TARNAME = @PACKAGE_TARNAME@
PACKAGE_VERSION = @PACKAGE_VERSION@
PATH_SEPARATOR = @PATH_SEPARATOR@
RANLIB = @RANLIB@
RM = @RM@
RUNTEST_FOR_DEJAGNU = @RUNTEST_FOR_DEJAGNU@
SET_MAKE = @SET_MAKE@
SHELL = @SHELL@
STRIP = @STRIP@

SUBDIRS = data
VERSION = @VERSION@
XMLIO_CONFIG = @XMLIO_CONFIG@
XMLIO_INCLUDES = @XMLIO_INCLUDES@
XMLIO_LIBS = @XMLIO_LIBS@
XMLIO_PREFIX = @XMLIO_PREFIX@
ac_ct_CC = @ac_ct_CC@
ac_ct_CXX = @ac_ct_CXX@
ac_ct_RANLIB = @ac_ct_RANLIB@
ac_ct_STRIP = @ac_ct_STRIP@
am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@
am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@
am__include = @am__include@
am__quote = @am__quote@
bindir = @bindir@
build = @build@
build_alias = @build_alias@
build_cpu = @build_cpu@
build_os = @build_os@
build_vendor = @build_vendor@
datadir = @datadir@
exec_prefix = @exec_prefix@
host = @host@
host_alias = @host_alias@
host_cpu = @host_cpu@
host_os = @host_os@
host_vendor = @host_vendor@
includedir = @includedir@
infodir = @infodir@
install_sh = @install_sh@
libdir = @libdir@
libexecdir = @libexecdir@
localstatedir = @localstatedir@
mandir = @mandir@
oldincludedir = @oldincludedir@
prefix = @prefix@
program_transform_name = @program_transform_name@
sbindir = @sbindir@
sharedstatedir = @sharedstatedir@
sysconfdir = @sysconfdir@
target_alias = @target_alias@

CCLD = $(CC)   -lstdc++


# tests and examples
AUTOMAKE_OPTIONS = dejagnu
EXPECT = $(EXPECT_FOR_DEJAGNU)
RUNTEST = $(RUNTEST_FOR_DEJAGNU)

CLEANFILES = ghmm.log ghmm.sum site.exp site.bak
MAINTAINERCLEANFILES = Makefile.in

# stuff from dejagnu
INCLUDES = -I$(top_srcdir)

#these tests will not be installed
# in progress: test_sdfoba nullmodel ciscreen test_sdmodel 
noinst_PROGRAMS = root_finder_test coin_toss_test two_states_three_symbols chmm shmm_viterbi_test generate_PHI test_gsl_ran_gaussian_tail sequences_test sequences_old_format 

LDADD = $(top_builddir)/ghmm/.libs/libghmm.a

COPYRIGHT = $(top_srcdir)/COPYRIGHT.txt
subdir = tests
mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
CONFIG_HEADER = $(top_builddir)/config.h
CONFIG_CLEAN_FILES =
noinst_PROGRAMS = root_finder_test$(EXEEXT) coin_toss_test$(EXEEXT) \
	two_states_three_symbols$(EXEEXT) chmm$(EXEEXT) \
	shmm_viterbi_test$(EXEEXT) generate_PHI$(EXEEXT) \
	test_gsl_ran_gaussian_tail$(EXEEXT) sequences_test$(EXEEXT) \
	sequences_old_format$(EXEEXT)
PROGRAMS = $(noinst_PROGRAMS)

chmm_SOURCES = chmm.c
chmm_OBJECTS = chmm.$(OBJEXT)
chmm_LDADD = $(LDADD)
chmm_DEPENDENCIES = $(top_builddir)/ghmm/.libs/libghmm.a
chmm_LDFLAGS =
coin_toss_test_SOURCES = coin_toss_test.c
coin_toss_test_OBJECTS = coin_toss_test.$(OBJEXT)
coin_toss_test_LDADD = $(LDADD)
coin_toss_test_DEPENDENCIES = $(top_builddir)/ghmm/.libs/libghmm.a
coin_toss_test_LDFLAGS =
generate_PHI_SOURCES = generate_PHI.c
generate_PHI_OBJECTS = generate_PHI.$(OBJEXT)
generate_PHI_LDADD = $(LDADD)
generate_PHI_DEPENDENCIES = $(top_builddir)/ghmm/.libs/libghmm.a
generate_PHI_LDFLAGS =
root_finder_test_SOURCES = root_finder_test.c
root_finder_test_OBJECTS = root_finder_test.$(OBJEXT)
root_finder_test_LDADD = $(LDADD)
root_finder_test_DEPENDENCIES = $(top_builddir)/ghmm/.libs/libghmm.a
root_finder_test_LDFLAGS =
sequences_old_format_SOURCES = sequences_old_format.c
sequences_old_format_OBJECTS = sequences_old_format.$(OBJEXT)
sequences_old_format_LDADD = $(LDADD)
sequences_old_format_DEPENDENCIES = $(top_builddir)/ghmm/.libs/libghmm.a
sequences_old_format_LDFLAGS =
sequences_test_SOURCES = sequences_test.c
sequences_test_OBJECTS = sequences_test.$(OBJEXT)
sequences_test_LDADD = $(LDADD)
sequences_test_DEPENDENCIES = $(top_builddir)/ghmm/.libs/libghmm.a
sequences_test_LDFLAGS =
shmm_viterbi_test_SOURCES = shmm_viterbi_test.c
shmm_viterbi_test_OBJECTS = shmm_viterbi_test.$(OBJEXT)
shmm_viterbi_test_LDADD = $(LDADD)
shmm_viterbi_test_DEPENDENCIES = $(top_builddir)/ghmm/.libs/libghmm.a
shmm_viterbi_test_LDFLAGS =
test_gsl_ran_gaussian_tail_SOURCES = test_gsl_ran_gaussian_tail.c
test_gsl_ran_gaussian_tail_OBJECTS = \
	test_gsl_ran_gaussian_tail.$(OBJEXT)
test_gsl_ran_gaussian_tail_LDADD = $(LDADD)
test_gsl_ran_gaussian_tail_DEPENDENCIES = \
	$(top_builddir)/ghmm/.libs/libghmm.a
test_gsl_ran_gaussian_tail_LDFLAGS =
two_states_three_symbols_SOURCES = two_states_three_symbols.c
two_states_three_symbols_OBJECTS = two_states_three_symbols.$(OBJEXT)
two_states_three_symbols_LDADD = $(LDADD)
two_states_three_symbols_DEPENDENCIES = \
	$(top_builddir)/ghmm/.libs/libghmm.a
two_states_three_symbols_LDFLAGS =

DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)
depcomp = $(SHELL) $(top_srcdir)/depcomp
am__depfiles_maybe = depfiles
@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/chmm.Po \
@AMDEP_TRUE@	./$(DEPDIR)/coin_toss_test.Po \
@AMDEP_TRUE@	./$(DEPDIR)/generate_PHI.Po \
@AMDEP_TRUE@	./$(DEPDIR)/root_finder_test.Po \
@AMDEP_TRUE@	./$(DEPDIR)/sequences_old_format.Po \
@AMDEP_TRUE@	./$(DEPDIR)/sequences_test.Po \
@AMDEP_TRUE@	./$(DEPDIR)/shmm_viterbi_test.Po \
@AMDEP_TRUE@	./$(DEPDIR)/test_gsl_ran_gaussian_tail.Po \
@AMDEP_TRUE@	./$(DEPDIR)/two_states_three_symbols.Po
COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \
	$(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
	$(AM_LDFLAGS) $(LDFLAGS) -o $@
DIST_SOURCES = chmm.c coin_toss_test.c generate_PHI.c root_finder_test.c \
	sequences_old_format.c sequences_test.c shmm_viterbi_test.c \
	test_gsl_ran_gaussian_tail.c two_states_three_symbols.c

RECURSIVE_TARGETS = info-recursive dvi-recursive pdf-recursive \
	ps-recursive install-info-recursive uninstall-info-recursive \
	all-recursive install-data-recursive install-exec-recursive \
	installdirs-recursive install-recursive uninstall-recursive \
	check-recursive installcheck-recursive
DIST_COMMON = Makefile.am Makefile.in
DIST_SUBDIRS = $(SUBDIRS)
SOURCES = chmm.c coin_toss_test.c generate_PHI.c root_finder_test.c sequences_old_format.c sequences_test.c shmm_viterbi_test.c test_gsl_ran_gaussian_tail.c two_states_three_symbols.c

all: all-recursive

.SUFFIXES:
.SUFFIXES: .c .lo .o .obj
$(srcdir)/Makefile.in:  Makefile.am  $(top_srcdir)/configure.in $(ACLOCAL_M4)
	cd $(top_srcdir) && \
	  $(AUTOMAKE) --gnu  tests/Makefile
Makefile:  $(srcdir)/Makefile.in  $(top_builddir)/config.status
	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)

clean-noinstPROGRAMS:
	@list='$(noinst_PROGRAMS)'; for p in $$list; do \
	  f=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
	  echo " rm -f $$p $$f"; \
	  rm -f $$p $$f ; \
	done
chmm$(EXEEXT): $(chmm_OBJECTS) $(chmm_DEPENDENCIES) 
	@rm -f chmm$(EXEEXT)
	$(LINK) $(chmm_LDFLAGS) $(chmm_OBJECTS) $(chmm_LDADD) $(LIBS)
coin_toss_test$(EXEEXT): $(coin_toss_test_OBJECTS) $(coin_toss_test_DEPENDENCIES) 
	@rm -f coin_toss_test$(EXEEXT)
	$(LINK) $(coin_toss_test_LDFLAGS) $(coin_toss_test_OBJECTS) $(coin_toss_test_LDADD) $(LIBS)
generate_PHI$(EXEEXT): $(generate_PHI_OBJECTS) $(generate_PHI_DEPENDENCIES) 
	@rm -f generate_PHI$(EXEEXT)
	$(LINK) $(generate_PHI_LDFLAGS) $(generate_PHI_OBJECTS) $(generate_PHI_LDADD) $(LIBS)
root_finder_test$(EXEEXT): $(root_finder_test_OBJECTS) $(root_finder_test_DEPENDENCIES) 
	@rm -f root_finder_test$(EXEEXT)
	$(LINK) $(root_finder_test_LDFLAGS) $(root_finder_test_OBJECTS) $(root_finder_test_LDADD) $(LIBS)
sequences_old_format$(EXEEXT): $(sequences_old_format_OBJECTS) $(sequences_old_format_DEPENDENCIES) 
	@rm -f sequences_old_format$(EXEEXT)
	$(LINK) $(sequences_old_format_LDFLAGS) $(sequences_old_format_OBJECTS) $(sequences_old_format_LDADD) $(LIBS)
sequences_test$(EXEEXT): $(sequences_test_OBJECTS) $(sequences_test_DEPENDENCIES) 
	@rm -f sequences_test$(EXEEXT)
	$(LINK) $(sequences_test_LDFLAGS) $(sequences_test_OBJECTS) $(sequences_test_LDADD) $(LIBS)
shmm_viterbi_test$(EXEEXT): $(shmm_viterbi_test_OBJECTS) $(shmm_viterbi_test_DEPENDENCIES) 
	@rm -f shmm_viterbi_test$(EXEEXT)
	$(LINK) $(shmm_viterbi_test_LDFLAGS) $(shmm_viterbi_test_OBJECTS) $(shmm_viterbi_test_LDADD) $(LIBS)
test_gsl_ran_gaussian_tail$(EXEEXT): $(test_gsl_ran_gaussian_tail_OBJECTS) $(test_gsl_ran_gaussian_tail_DEPENDENCIES) 
	@rm -f test_gsl_ran_gaussian_tail$(EXEEXT)
	$(LINK) $(test_gsl_ran_gaussian_tail_LDFLAGS) $(test_gsl_ran_gaussian_tail_OBJECTS) $(test_gsl_ran_gaussian_tail_LDADD) $(LIBS)
two_states_three_symbols$(EXEEXT): $(two_states_three_symbols_OBJECTS) $(two_states_three_symbols_DEPENDENCIES) 
	@rm -f two_states_three_symbols$(EXEEXT)
	$(LINK) $(two_states_three_symbols_LDFLAGS) $(two_states_three_symbols_OBJECTS) $(two_states_three_symbols_LDADD) $(LIBS)

mostlyclean-compile:
	-rm -f *.$(OBJEXT) core *.core

distclean-compile:
	-rm -f *.tab.c

@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/chmm.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/coin_toss_test.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/generate_PHI.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/root_finder_test.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/sequences_old_format.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/sequences_test.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/shmm_viterbi_test.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/test_gsl_ran_gaussian_tail.Po@am__quote@
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/two_states_three_symbols.Po@am__quote@

distclean-depend:
	-rm -rf ./$(DEPDIR)

.c.o:
@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" \
@am__fastdepCC_TRUE@	  -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<; \
@am__fastdepCC_TRUE@	then mv "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; \
@am__fastdepCC_TRUE@	else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; \
@am__fastdepCC_TRUE@	fi
@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCC_FALSE@	depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCC_FALSE@	$(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
@am__fastdepCC_FALSE@	$(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$<

.c.obj:
@am__fastdepCC_TRUE@	if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" \
@am__fastdepCC_TRUE@	  -c -o $@ `if test -f '$<'; then $(CYGPATH_W) '$<'; else $(CYGPATH_W) '$(srcdir)/$<'; fi`; \
@am__fastdepCC_TRUE@	then mv "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; \