📄 plotgauss2d.m
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function h=plotgauss2d(mu, Sigma)
% PLOTGAUSS2D Plot a 2D Gaussian as an ellipse with optional cross hairs
% h=plotgauss2(mu, Sigma)
%
h = plotcov2(mu, Sigma);
return;
%%%%%%%%%%%%%%%%%%%%%%%%
% PLOTCOV2 - Plots a covariance ellipse with major and minor axes
% for a bivariate Gaussian distribution.
%
% Usage:
% h = plotcov2(mu, Sigma[, OPTIONS]);
%
% Inputs:
% mu - a 2 x 1 vector giving the mean of the distribution.
% Sigma - a 2 x 2 symmetric positive semi-definite matrix giving
% the covariance of the distribution (or the zero matrix).
%
% Options:
% 'conf' - a scalar between 0 and 1 giving the confidence
% interval (i.e., the fraction of probability mass to
% be enclosed by the ellipse); default is 0.9.
% 'num-pts' - the number of points to be used to plot the
% ellipse; default is 100.
%
% This function also accepts options for PLOT.
%
% Outputs:
% h - a vector of figure handles to the ellipse boundary and
% its major and minor axes
%
% See also: PLOTCOV3
% Copyright (C) 2002 Mark A. Paskin
function h = plotcov2(mu, Sigma, varargin)
if size(Sigma) ~= [2 2], error('Sigma must be a 2 by 2 matrix'); end
if length(mu) ~= 2, error('mu must be a 2 by 1 vector'); end
[p, ...
n, ...
plot_opts] = process_options(varargin, 'conf', 0.9, ...
'num-pts', 100);
h = [];
holding = ishold;
if (Sigma == zeros(2, 2))
z = mu;
else
% Compute the Mahalanobis radius of the ellipsoid that encloses
% the desired probability mass.
k = conf2mahal(p, 2);
% The major and minor axes of the covariance ellipse are given by
% the eigenvectors of the covariance matrix. Their lengths (for
% the ellipse with unit Mahalanobis radius) are given by the
% square roots of the corresponding eigenvalues.
if (issparse(Sigma))
[V, D] = eigs(Sigma);
else
[V, D] = eig(Sigma);
end
% Compute the points on the surface of the ellipse.
t = linspace(0, 2*pi, n);
u = [cos(t); sin(t)];
w = (k * V * sqrt(D)) * u;
z = repmat(mu, [1 n]) + w;
% Plot the major and minor axes.
L = k * sqrt(diag(D));
h = plot([mu(1); mu(1) + L(1) * V(1, 1)], ...
[mu(2); mu(2) + L(1) * V(2, 1)], plot_opts{:});
hold on;
h = [h; plot([mu(1); mu(1) + L(2) * V(1, 2)], ...
[mu(2); mu(2) + L(2) * V(2, 2)], plot_opts{:})];
end
h = [h; plot(z(1, :), z(2, :), plot_opts{:})];
if (~holding) hold off; end
%%%%%%%%%%%%
% CONF2MAHAL - Translates a confidence interval to a Mahalanobis
% distance. Consider a multivariate Gaussian
% distribution of the form
%
% p(x) = 1/sqrt((2 * pi)^d * det(C)) * exp((-1/2) * MD(x, m, inv(C)))
%
% where MD(x, m, P) is the Mahalanobis distance from x
% to m under P:
%
% MD(x, m, P) = (x - m) * P * (x - m)'
%
% A particular Mahalanobis distance k identifies an
% ellipsoid centered at the mean of the distribution.
% The confidence interval associated with this ellipsoid
% is the probability mass enclosed by it. Similarly,
% a particular confidence interval uniquely determines
% an ellipsoid with a fixed Mahalanobis distance.
%
% If X is an d dimensional Gaussian-distributed vector,
% then the Mahalanobis distance of X is distributed
% according to the Chi-squared distribution with d
% degrees of freedom. Thus, the Mahalanobis distance is
% determined by evaluating the inverse cumulative
% distribution function of the chi squared distribution
% up to the confidence value.
%
% Usage:
%
% m = conf2mahal(c, d);
%
% Inputs:
%
% c - the confidence interval
% d - the number of dimensions of the Gaussian distribution
%
% Outputs:
%
% m - the Mahalanobis radius of the ellipsoid enclosing the
% fraction c of the distribution's probability mass
%
% See also: MAHAL2CONF
% Copyright (C) 2002 Mark A. Paskin
function m = conf2mahal(c, d)
m = chi2inv(c, d); % matlab stats toolbox
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