makefile.in

一个用C语言编写的通用的隐性马尔可夫代码库

# Makefile.in generated by automake 1.7.2 from Makefile.am.
# @configure_input@

# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
# Free Software Foundation, Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.

# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
# PARTICULAR PURPOSE.

@SET_MAKE@

#  author       : Achim Gaedke
#  filename     : /zpr/bspk/src/hmm/ghmm/ghmm++/examples/Makefile.am
#  created      : DATE: 28 June 2001
#  $Id: Makefile.am,v 1.14 2004/02/26 11:59:01 wasinee Exp $
#  revision date : $Date: 2004/02/26 11:59:01 $
# 
# Copyright (C) 1998-2001, ZAIK/ZPR, Universit鋞 zu K鰈n
# 
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
# 
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
# 
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
# 

srcdir = @srcdir@
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pkglibdir = $(libdir)/@PACKAGE@
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am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
INSTALL = @INSTALL@
install_sh_DATA = $(install_sh) -c -m 644
install_sh_PROGRAM = $(install_sh) -c
install_sh_SCRIPT = $(install_sh) -c
INSTALL_HEADER = $(INSTALL_DATA)
transform = $(program_transform_name)
NORMAL_INSTALL = :
PRE_INSTALL = :
POST_INSTALL = :
NORMAL_UNINSTALL = :
PRE_UNINSTALL = :
POST_UNINSTALL = :
host_triplet = @host@
ACLOCAL = @ACLOCAL@
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AMDEP_TRUE = @AMDEP_TRUE@
AMTAR = @AMTAR@
AUTOCONF = @AUTOCONF@
AUTOHEADER = @AUTOHEADER@
AUTOMAKE = @AUTOMAKE@
AWK = @AWK@
CC = @CC@
CCDEPMODE = @CCDEPMODE@
CFLAGS = @CFLAGS@
CPP = @CPP@
CPPFLAGS = @CPPFLAGS@
CXX = @CXX@
CXXCPP = @CXXCPP@
CXXDEPMODE = @CXXDEPMODE@
CXXFLAGS = @CXXFLAGS@
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ECHO_T = @ECHO_T@
EGREP = @EGREP@
EXEEXT = @EXEEXT@
EXPECT_FOR_DEJAGNU = @EXPECT_FOR_DEJAGNU@
GHMM_VERSION_AGE = @GHMM_VERSION_AGE@
GHMM_VERSION_CURRENT = @GHMM_VERSION_CURRENT@
GHMM_VERSION_REVISION = @GHMM_VERSION_REVISION@
GSL_CFLAGS = @GSL_CFLAGS@
GSL_CONFIG = @GSL_CONFIG@
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INSTALL_DATA = @INSTALL_DATA@
INSTALL_PROGRAM = @INSTALL_PROGRAM@
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PATH_SEPARATOR = @PATH_SEPARATOR@
RANLIB = @RANLIB@
RM = @RM@
RUNTEST_FOR_DEJAGNU = @RUNTEST_FOR_DEJAGNU@
SET_MAKE = @SET_MAKE@
SHELL = @SHELL@
STRIP = @STRIP@

SUBDIRS = .
VERSION = @VERSION@
XMLIO_CONFIG = @XMLIO_CONFIG@
XMLIO_INCLUDES = @XMLIO_INCLUDES@
XMLIO_LIBS = @XMLIO_LIBS@
XMLIO_PREFIX = @XMLIO_PREFIX@
ac_ct_CC = @ac_ct_CC@
ac_ct_CXX = @ac_ct_CXX@
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host_os = @host_os@
host_vendor = @host_vendor@
includedir = @includedir@
infodir = @infodir@
install_sh = @install_sh@
libdir = @libdir@
libexecdir = @libexecdir@
localstatedir = @localstatedir@
mandir = @mandir@
oldincludedir = @oldincludedir@
prefix = @prefix@
program_transform_name = @program_transform_name@
sbindir = @sbindir@
sharedstatedir = @sharedstatedir@
sysconfdir = @sysconfdir@
target_alias = @target_alias@
CLEANFILES = \
chmm.tmp \
message.txt

DISTCLEANFILES = *~
MAINTAINERCLEANFILES = Makefile.in

#
# if you want to link ghmm++ from C-code, you must use dynamic linking, 
#
# NOTICE: It is important to link libstdc++ when linking from gcc to a C++ library. 
#
CCLD = $(CC)   -lstdc++
CXXLD = $(CXX)  -lstdc++

INCLUDES = -I$(top_srcdir) $(XMLIO_INCLUDES)
LDADD = -L/project/algorithmics/lib -lxmlio $(top_builddir)/ghmm++/libghmm++.la $(top_builddir)/ghmm/.libs/libghmm.a 
EXTRA_DIST = nvs.xml nvs.mod nvs.sqd gene_hmm.gml

noinst_PROGRAMS = dna chmm generiere_nvs generiere_nvs_old_files coin_toss_test vector_test create_sequence read_graphml 

# noinst_PROGRAMS = read_cxml
coin_toss_test_SOURCES = coin_toss_test.cpp
chmm_SOURCES = chmm.cpp
generiere_nvs_SOURCES = generiere_nvs.cpp
generiere_nvs_old_files_SOURCES = generiere_nvs_old_files.cpp
dna_SOURCES = dna.cpp
vector_test_SOURCES = vector_test.cpp
create_sequence_SOURCES = create_sequence.cpp
read_graphml_SOURCES = read_graphml.cpp
testviterbi_SOURCES = testviterbi.cpp

COPYRIGHT = $(top_srcdir)/COPYRIGHT.txt
subdir = ghmm++/examples
mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
CONFIG_HEADER = $(top_builddir)/config.h
CONFIG_CLEAN_FILES =
noinst_PROGRAMS = dna$(EXEEXT) chmm$(EXEEXT) generiere_nvs$(EXEEXT) \
	generiere_nvs_old_files$(EXEEXT) coin_toss_test$(EXEEXT) \
	vector_test$(EXEEXT) create_sequence$(EXEEXT) \
	read_graphml$(EXEEXT)
PROGRAMS = $(noinst_PROGRAMS)

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	$(top_builddir)/ghmm/.libs/libghmm.a
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am_coin_toss_test_OBJECTS = coin_toss_test.$(OBJEXT)
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	$(top_builddir)/ghmm/.libs/libghmm.a
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am_generiere_nvs_OBJECTS = generiere_nvs.$(OBJEXT)
generiere_nvs_OBJECTS = $(am_generiere_nvs_OBJECTS)
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	$(top_builddir)/ghmm/.libs/libghmm.a
generiere_nvs_LDFLAGS =
am_generiere_nvs_old_files_OBJECTS = generiere_nvs_old_files.$(OBJEXT)
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generiere_nvs_old_files_DEPENDENCIES = \
	$(top_builddir)/ghmm++/libghmm++.la \
	$(top_builddir)/ghmm/.libs/libghmm.a
generiere_nvs_old_files_LDFLAGS =
am_read_graphml_OBJECTS = read_graphml.$(OBJEXT)
read_graphml_OBJECTS = $(am_read_graphml_OBJECTS)
read_graphml_LDADD = $(LDADD)
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	$(top_builddir)/ghmm/.libs/libghmm.a
read_graphml_LDFLAGS =
am_vector_test_OBJECTS = vector_test.$(OBJEXT)
vector_test_OBJECTS = $(am_vector_test_OBJECTS)
vector_test_LDADD = $(LDADD)
vector_test_DEPENDENCIES = $(top_builddir)/ghmm++/libghmm++.la \
	$(top_builddir)/ghmm/.libs/libghmm.a
vector_test_LDFLAGS =

DEFAULT_INCLUDES =  -I. -I$(srcdir) -I$(top_builddir)
depcomp = $(SHELL) $(top_srcdir)/depcomp
am__depfiles_maybe = depfiles
@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/chmm.Po \
@AMDEP_TRUE@	./$(DEPDIR)/coin_toss_test.Po \
@AMDEP_TRUE@	./$(DEPDIR)/create_sequence.Po ./$(DEPDIR)/dna.Po \
@AMDEP_TRUE@	./$(DEPDIR)/generiere_nvs.Po \
@AMDEP_TRUE@	./$(DEPDIR)/generiere_nvs_old_files.Po \
@AMDEP_TRUE@	./$(DEPDIR)/read_graphml.Po \
@AMDEP_TRUE@	./$(DEPDIR)/vector_test.Po
CXXCOMPILE = $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) \
	$(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS)
LTCXXCOMPILE = $(LIBTOOL) --mode=compile $(CXX) $(DEFS) \
	$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
	$(AM_CXXFLAGS) $(CXXFLAGS)
CXXLINK = $(LIBTOOL) --mode=link $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) \
	$(AM_LDFLAGS) $(LDFLAGS) -o $@
DIST_SOURCES = $(chmm_SOURCES) $(coin_toss_test_SOURCES) \
	$(create_sequence_SOURCES) $(dna_SOURCES) \
	$(generiere_nvs_SOURCES) $(generiere_nvs_old_files_SOURCES) \
	$(read_graphml_SOURCES) $(vector_test_SOURCES)

RECURSIVE_TARGETS = info-recursive dvi-recursive pdf-recursive \
	ps-recursive install-info-recursive uninstall-info-recursive \
	all-recursive install-data-recursive install-exec-recursive \
	installdirs-recursive install-recursive uninstall-recursive \
	check-recursive installcheck-recursive
DIST_COMMON = Makefile.am Makefile.in
DIST_SUBDIRS = $(SUBDIRS)
SOURCES = $(chmm_SOURCES) $(coin_toss_test_SOURCES) $(create_sequence_SOURCES) $(dna_SOURCES) $(generiere_nvs_SOURCES) $(generiere_nvs_old_files_SOURCES) $(read_graphml_SOURCES) $(vector_test_SOURCES)

all: all-recursive

.SUFFIXES:
.SUFFIXES: .cpp .lo .o .obj
$(srcdir)/Makefile.in:  Makefile.am  $(top_srcdir)/configure.in $(ACLOCAL_M4)
	cd $(top_srcdir) && \
	  $(AUTOMAKE) --gnu  ghmm++/examples/Makefile
Makefile:  $(srcdir)/Makefile.in  $(top_builddir)/config.status
	cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)

clean-noinstPROGRAMS:
	@list='$(noinst_PROGRAMS)'; for p in $$list; do \
	  f=`echo $$p|sed 's/$(EXEEXT)$$//'`; \
	  echo " rm -f $$p $$f"; \
	  rm -f $$p $$f ; \
	done
chmm$(EXEEXT): $(chmm_OBJECTS) $(chmm_DEPENDENCIES) 
	@rm -f chmm$(EXEEXT)
	$(CXXLINK) $(chmm_LDFLAGS) $(chmm_OBJECTS) $(chmm_LDADD) $(LIBS)
coin_toss_test$(EXEEXT): $(coin_toss_test_OBJECTS) $(coin_toss_test_DEPENDENCIES) 
	@rm -f coin_toss_test$(EXEEXT)
	$(CXXLINK) $(coin_toss_test_LDFLAGS) $(coin_toss_test_OBJECTS) $(coin_toss_test_LDADD) $(LIBS)
create_sequence$(EXEEXT): $(create_sequence_OBJECTS) $(create_sequence_DEPENDENCIES) 
	@rm -f create_sequence$(EXEEXT)
	$(CXXLINK) $(create_sequence_LDFLAGS) $(create_sequence_OBJECTS) $(create_sequence_LDADD) $(LIBS)
dna$(EXEEXT): $(dna_OBJECTS) $(dna_DEPENDENCIES) 
	@rm -f dna$(EXEEXT)
	$(CXXLINK) $(dna_LDFLAGS) $(dna_OBJECTS) $(dna_LDADD) $(LIBS)
generiere_nvs$(EXEEXT): $(generiere_nvs_OBJECTS) $(generiere_nvs_DEPENDENCIES) 
	@rm -f generiere_nvs$(EXEEXT)
	$(CXXLINK) $(generiere_nvs_LDFLAGS) $(generiere_nvs_OBJECTS) $(generiere_nvs_LDADD) $(LIBS)
generiere_nvs_old_files$(EXEEXT): $(generiere_nvs_old_files_OBJECTS) $(generiere_nvs_old_files_DEPENDENCIES) 
	@rm -f generiere_nvs_old_files$(EXEEXT)
	$(CXXLINK) $(generiere_nvs_old_files_LDFLAGS) $(generiere_nvs_old_files_OBJECTS) $(generiere_nvs_old_files_LDADD) $(LIBS)
read_graphml$(EXEEXT): $(read_graphml_OBJECTS) $(read_graphml_DEPENDENCIES) 
	@rm -f read_graphml$(EXEEXT)
	$(CXXLINK) $(read_graphml_LDFLAGS) $(read_graphml_OBJECTS) $(read_graphml_LDADD) $(LIBS)
vector_test$(EXEEXT): $(vector_test_OBJECTS) $(vector_test_DEPENDENCIES) 
	@rm -f vector_test$(EXEEXT)
	$(CXXLINK) $(vector_test_LDFLAGS) $(vector_test_OBJECTS) $(vector_test_LDADD) $(LIBS)

mostlyclean-compile:
	-rm -f *.$(OBJEXT) core *.core

distclean-compile:
	-rm -f *.tab.c

@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/chmm.Po@am__quote@