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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"><!--NewPage--><HTML><HEAD><!-- Generated by javadoc (build 1.4.2_05) on Mon Mar 07 15:27:43 NZDT 2005 --><TITLE>ClusterEvaluation</TITLE><META NAME="keywords" CONTENT="weka.clusterers.ClusterEvaluation class"><LINK REL ="stylesheet" TYPE="text/css" HREF="../../stylesheet.css" TITLE="Style"><SCRIPT type="text/javascript">function windowTitle(){    parent.document.title="ClusterEvaluation";}</SCRIPT></HEAD><BODY BGCOLOR="white" onload="windowTitle();"><!-- ========= START OF TOP NAVBAR ======= --><A NAME="navbar_top"><!-- --></A><A HREF="#skip-navbar_top" title="Skip navigation links"></A><TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY=""><TR><TD COLSPAN=3 BGCOLOR="#EEEEFF" CLASS="NavBarCell1"><A NAME="navbar_top_firstrow"><!-- --></A><TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">  <TR ALIGN="center" VALIGN="top">  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A>&nbsp;</TD>  <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Class</B></FONT>&nbsp;</TD>  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../deprecated-list.html"><FONT CLASS="NavBarFont1"><B>Deprecated</B></FONT></A>&nbsp;</TD>  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../index-all.html"><FONT CLASS="NavBarFont1"><B>Index</B></FONT></A>&nbsp;</TD>  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../../Tutorial.pdf"><FONT CLASS="NavBarFont1"><B>Help</B></FONT></A>&nbsp;</TD> <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="http://www.cs.waikato.ac.nz/ml/weka/index.html"><FONT CLASS="NavBarFont1"><B>Weka's home</B></FONT></A>&nbsp;</TD>  </TR></TABLE></TD><TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM></EM></TD></TR><TR><TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">&nbsp;<A HREF="../../weka/clusterers/Clusterer.html" title="class in weka.clusterers"><B>PREV CLASS</B></A>&nbsp;&nbsp;<A HREF="../../weka/clusterers/Cobweb.html" title="class in weka.clusterers"><B>NEXT CLASS</B></A></FONT></TD><TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">  <A HREF="../../index.html" target="_top"><B>FRAMES</B></A>  &nbsp;&nbsp;<A HREF="ClusterEvaluation.html" target="_top"><B>NO FRAMES</B></A>  &nbsp;&nbsp;<SCRIPT type="text/javascript">  <!--  if(window==top) {    document.writeln('<A HREF="../../allclasses-noframe.html"><B>All Classes</B></A>');  }  //--></SCRIPT><NOSCRIPT>  <A HREF="../../allclasses-noframe.html"><B>All Classes</B></A></NOSCRIPT></FONT></TD></TR><TR><TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">  SUMMARY:&nbsp;NESTED&nbsp;|&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_summary">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_summary">METHOD</A></FONT></TD><TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">DETAIL:&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_detail">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_detail">METHOD</A></FONT></TD></TR></TABLE><A NAME="skip-navbar_top"></A><!-- ========= END OF TOP NAVBAR ========= --><HR><!-- ======== START OF CLASS DATA ======== --><H2><FONT SIZE="-1">weka.clusterers</FONT><BR>Class ClusterEvaluation</H2><PRE>java.lang.Object  <IMG SRC="../../resources/inherit.gif" ALT="extended by"><B>weka.clusterers.ClusterEvaluation</B></PRE><DL><DT><B>All Implemented Interfaces:</B> <DD>java.io.Serializable</DD></DL><HR><DL><DT>public class <B>ClusterEvaluation</B><DT>extends java.lang.Object<DT>implements java.io.Serializable</DL><P>Class for evaluating clustering models.<p> Valid options are: <p> -t <name of the training file> <br> Specify the training file. <p> -T <name of the test file> <br> Specify the test file to apply clusterer to. <p> -d <name of file to save clustering model to> <br> Specify output file. <p> -l <name of file to load clustering model from> <br> Specifiy input file. <p> -p <attribute range> <br> Output predictions. Predictions are for the training file if only the training file is specified, otherwise they are for the test file. The range specifies attribute values to be output with the predictions. Use '-p 0' for none. <p> -x <num folds> <br> Set the number of folds for a cross validation of the training data. Cross validation can only be done for distribution clusterers and will be performed if the test file is missing. <p> -c <class> <br> Set the class attribute. If set, then class based evaluation of clustering is performed. <p><P><P><DL><DT><B>Version:</B></DT>  <DD>$Revision: 1.27 $</DD><DT><B>Author:</B></DT>  <DD>Mark Hall (mhall@cs.waikato.ac.nz)</DD><DT><B>See Also:</B><DD><A HREF="../../serialized-form.html#weka.clusterers.ClusterEvaluation">Serialized Form</A></DL><HR><P><!-- ======== NESTED CLASS SUMMARY ======== --><!-- =========== FIELD SUMMARY =========== --><!-- ======== CONSTRUCTOR SUMMARY ======== --><A NAME="constructor_summary"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor"><TD COLSPAN=2><FONT SIZE="+2"><B>Constructor Summary</B></FONT></TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#ClusterEvaluation()">ClusterEvaluation</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Constructor.</TD></TR></TABLE>&nbsp;<!-- ========== METHOD SUMMARY =========== --><A NAME="method_summary"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor"><TD COLSPAN=2><FONT SIZE="+2"><B>Method Summary</B></FONT></TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;java.lang.String</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#clusterResultsToString()">clusterResultsToString</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;return the results of clustering.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>static&nbsp;double</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#crossValidateModel(weka.clusterers.DensityBasedClusterer, weka.core.Instances, int, java.util.Random)">crossValidateModel</A></B>(<A HREF="../../weka/clusterers/DensityBasedClusterer.html" title="class in weka.clusterers">DensityBasedClusterer</A>&nbsp;clusterer,                   <A HREF="../../weka/core/Instances.html" title="class in weka.core">Instances</A>&nbsp;data,                   int&nbsp;numFolds,                   java.util.Random&nbsp;random)</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Perform a cross-validation for DensityBasedClusterer on a set of instances.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>static&nbsp;java.lang.String</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#crossValidateModel(java.lang.String, weka.core.Instances, int, java.lang.String[], java.util.Random)">crossValidateModel</A></B>(java.lang.String&nbsp;clustererString,                   <A HREF="../../weka/core/Instances.html" title="class in weka.core">Instances</A>&nbsp;data,                   int&nbsp;numFolds,                   java.lang.String[]&nbsp;options,                   java.util.Random&nbsp;random)</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Performs a cross-validation  for a DensityBasedClusterer clusterer on a set of instances.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>static&nbsp;java.lang.String</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#evaluateClusterer(weka.clusterers.Clusterer, java.lang.String[])">evaluateClusterer</A></B>(<A HREF="../../weka/clusterers/Clusterer.html" title="class in weka.clusterers">Clusterer</A>&nbsp;clusterer,                  java.lang.String[]&nbsp;options)</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Evaluates a clusterer with the options given in an array of strings.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;void</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#evaluateClusterer(weka.core.Instances)">evaluateClusterer</A></B>(<A HREF="../../weka/core/Instances.html" title="class in weka.core">Instances</A>&nbsp;test)</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Evaluate the clusterer on a set of instances.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;int[]</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#getClassesToClusters()">getClassesToClusters</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Return the array (ordered by cluster number) of minimum error class to cluster mappings</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;double[]</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#getClusterAssignments()">getClusterAssignments</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Return an array of cluster assignments corresponding to the most recent set of instances clustered.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;double</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#getLogLikelihood()">getLogLikelihood</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Return the log likelihood corresponding to the most recent set of instances clustered.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;int</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#getNumClusters()">getNumClusters</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Return the number of clusters found for the most recent call to evaluateClusterer</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>static&nbsp;void</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#main(java.lang.String[])">main</A></B>(java.lang.String[]&nbsp;args)</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Main method for testing this class.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;void</CODE></FONT></TD><TD><CODE><B><A HREF="../../weka/clusterers/ClusterEvaluation.html#setClusterer(weka.clusterers.Clusterer)">setClusterer</A></B>(<A HREF="../../weka/clusterers/Clusterer.html" title="class in weka.clusterers">Clusterer</A>&nbsp;clusterer)</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;set the clusterer</TD></TR></TABLE>&nbsp;<A NAME="methods_inherited_from_class_java.lang.Object"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor"><TD><B>Methods inherited from class java.lang.Object</B></TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD><CODE>equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</CODE></TD></TR></TABLE>&nbsp;<P><!-- ============ FIELD DETAIL =========== --><!-- ========= CONSTRUCTOR DETAIL ======== --><A NAME="constructor_detail"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor"><TD COLSPAN=1><FONT SIZE="+2"><B>Constructor Detail</B></FONT></TD></TR></TABLE><A NAME="ClusterEvaluation()"><!-- --></A><H3>ClusterEvaluation</H3><PRE>

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