📄 runs.cpp
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// This is -*- C++ -*-// $Id: runs.cpp,v 1.6 1999/10/19 00:40:14 trow Exp $/* runs.cpp * * Copyright (C) 1998, 1999 EMC Capital Management, Inc. * * Developed by Jon Trowbridge <trow@emccta.com>. * * This library is free software; you can redistribute it and/or * modify it under the terms of the GNU Library General Public * License as published by the Free Software Foundation; either * version 2 of the License, or (at your option) any later version. * * This library is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Library General Public License for more details. * * You should have received a copy of the GNU Library General Public * License along with this library; if not, write to the Free Software * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA * 02111-1307, USA. */#include <config.h>#include <math.h>#include <Exception.h>#include <specfns.h>#include <assert.h>#include "runs.h"// Returns the pdf in an array of length N-1double*runs_exact_pdf_array(unsigned N, double p){ if (p < 0) throw Exception("Probability less than zero."); if (p > 1) throw Exception("Probability greater than one."); if (N < 2) throw Exception("Sample size too small."); double q = 1-p; double* Rp = new double[N-1]; double* Rq = new double[N-1]; Rp[0] = p; Rq[0] = q; for(size_t i=1; i<N-1; ++i) Rp[i] = Rq[i] = 0; size_t j=2; while (j < N) { ++j; double Pp = 0, Pq = 0; for(size_t k=0; k<j-1; ++k) { double xp = Rp[k], xq = Rq[k]; Rp[k] = p * (xp + Pq); Rq[k] = q * (xq + Pp); Pp = xp, Pq = xq; } } for(size_t i=0; i<N-1; ++i) Rp[i] += Rq[i]; delete [] Rq; return Rp;}double*runs_exact_cdf_array(unsigned N, double p){ double* pdf = runs_exact_pdf_array(N, p); for(size_t i=1; i<N-1; ++i) pdf[i] += pdf[i-1]; return pdf;}// Returns probability that number of runs is <= k.doubleruns_exact_cdf(unsigned N, double p, unsigned k){ if (k < 1) return 0; if (N != 0 && k >= N-1) return 1.0; double* cdf = runs_exact_cdf_array(N,p); double pp = cdf[k-1]; delete [] cdf; return pp;}doubleruns_approx_cdf(unsigned N, double p, unsigned k){ if (p < 0) throw Exception("Probability less than zero."); if (p > 1) throw Exception("Probability greater than one."); if (N < 2) throw Exception("Sample size too small."); if (k < 0) return 0.0; if (k >= N-1) return 1.0; double mean = 1 + 2*N*p*(1-p); double sdev = sqrt(2*p*(1-p)*N*(2*N*p*(1-p)-1)/(N-1)); return normal_cdf(mean, sdev, k);}// runs_mean() and runs_sdev() are based on asymptotic properties of the// distribution of runs. For small samples, these will be inaccurate.// Eventually I need to add look-up tables of tail probabilities for// sample sizes up to about 20 or so.doubleRunsCount::runs_mean() const{ return size_ ? 1+2.0*t_*f_/size_ : 0;}doubleRunsCount::runs_sdev() const{ if (size_ == 0 || t_ == size_ || f_ == size_) return 0; double tf = t_*f_; double N = size_; return sqrt(2*tf*(2*tf-N)/(N*N*(N-1)));}doubleRunsCount::p_approx() const{ return 2*normal_cdf(fabs(z()))-1;}doubleRunsCount::p_exact() const{ double mean_dev = fabs(runs_mean() - runs()); unsigned N = size(); double* pdf = runs_exact_pdf_array(N, prob_false()); double p = 0; unsigned i0 = (int)floor(runs_mean() - mean_dev); unsigned i1 = (int)ceil(runs_mean() + mean_dev); for(unsigned i=0; i<=i0; ++i) p += pdf[i]; for(unsigned i=i1; i<N-1; ++i) p += pdf[i]; return p;}voidRunsCount::add(bool x){ if (size_ == 0 || last_ != x) ++runs_; ++size_; x ? ++t_ : ++f_; last_ = x;}////////////////////////////////////////////////////////////////doubleRunsUpDown::runs_mean() const{ return size_ > 2 ? (2.0*size_-1)/3.0 : (size_ ? 1 : 0);}doubleRunsUpDown::runs_sdev() const{ return size_ >= 2 ? sqrt((16.0*size_-29.0)/90.0) : 0;}doubleRunsUpDown::p() const{ return 2*normal_cdf(fabs(z()))-1;}voidRunsUpDown::add(double x){ if (size_ == 0) { ++runs_; constant_ = true; } else if (constant_) { if (x != last_) { last_higher_ = (x > last_); constant_ = false; } } else { if (last_higher_ ? (x < last_) : (x > last_)) { last_higher_ = !last_higher_; ++runs_; } } last_ = x; ++size_;}// $Id: runs.cpp,v 1.6 1999/10/19 00:40:14 trow Exp $
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