seqfeatdata.cpp

来自「ncbi源码」· C++ 代码 · 共 1,864 行 · 第 1/4 页

    ADD_QUAL(note);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(misc_difference)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(clone);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(phenotype);
    ADD_QUAL(replace);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(misc_feature)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(number);
    ADD_QUAL(phenotype);
    ADD_QUAL(product);
    ADD_QUAL(pseudo);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(misc_recomb)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(organism);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(misc_RNA)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(operon);
    ADD_QUAL(product);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(misc_signal)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(operon);
    ADD_QUAL(phenotype);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(misc_structure)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(modified_base)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(frequency);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(mod_base);
    ADD_QUAL(note);
    ADD_QUAL(usedin);
END_SUBTYPE

//START_SUBTYPE(mutation)
//END_SUBTYPE

START_SUBTYPE(N_region)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(product);
    ADD_QUAL(pseudo);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(old_sequence)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(replace);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(polyA_signal)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(polyA_site)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(precursor_RNA)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(operon);
    ADD_QUAL(product);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(prim_transcript)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(operon);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(primer_bind)
    ADD_QUAL(PCR_conditions);
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(promoter)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(operon);
    ADD_QUAL(phenotype);
    ADD_QUAL(pseudo);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(protein_bind)
    ADD_QUAL(allele);
    ADD_QUAL(bound_moiety);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(RBS)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(repeat_region)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(insertion_seq);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(rpt_family);
    ADD_QUAL(rpt_type);
    ADD_QUAL(rpt_unit);
    ADD_QUAL(standard_name);
    ADD_QUAL(transposon);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(repeat_unit)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(rpt_family);
    ADD_QUAL(rpt_type);
    ADD_QUAL(rpt_unit);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(rep_origin)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(direction);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(S_region)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(product);
    ADD_QUAL(pseudo);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(satellite)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(rpt_family);
    ADD_QUAL(rpt_type);
    ADD_QUAL(rpt_unit);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(sig_peptide)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(product);
    ADD_QUAL(protein_id);
    ADD_QUAL(pseudo);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(source)
    ADD_QUAL(cell_line);
    ADD_QUAL(cell_type);
    ADD_QUAL(chromosome);
    ADD_QUAL(citation);
    ADD_QUAL(clone);
    ADD_QUAL(clone_lib);
    ADD_QUAL(country);
    ADD_QUAL(cultivar);
    ADD_QUAL(db_xref);
    ADD_QUAL(dev_stage);
    ADD_QUAL(ecotype);
    ADD_QUAL(environmental_sample);
    ADD_QUAL(focus);
    ADD_QUAL(frequency);
    ADD_QUAL(germline);
    ADD_QUAL(haplotype);
    ADD_QUAL(isolate);
    ADD_QUAL(isolation_source);
    ADD_QUAL(lab_host);
    ADD_QUAL(label);
    ADD_QUAL(macronuclear);
    ADD_QUAL(map);
    ADD_QUAL(mol_type);
    ADD_QUAL(note);
    ADD_QUAL(organelle);
    ADD_QUAL(organism);
    ADD_QUAL(plasmid);
    ADD_QUAL(pop_variant);
    ADD_QUAL(proviral);
    ADD_QUAL(rearranged);
    ADD_QUAL(segment);
    ADD_QUAL(serotype);
    ADD_QUAL(serovar);
    ADD_QUAL(sex);
    ADD_QUAL(specific_host);
    ADD_QUAL(specimen_voucher);
    ADD_QUAL(strain);
    ADD_QUAL(sub_clone);
    ADD_QUAL(sub_species);
    ADD_QUAL(sub_strain);
    ADD_QUAL(tissue_lib);
    ADD_QUAL(tissue_type);
    ADD_QUAL(transgenic);
    ADD_QUAL(usedin);
    ADD_QUAL(variety);
    ADD_QUAL(virion);
END_SUBTYPE

START_SUBTYPE(stem_loop)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(function);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(operon);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(STS)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);
    ADD_QUAL(standard_name);
    ADD_QUAL(usedin);
END_SUBTYPE

START_SUBTYPE(TATA_signal)
    ADD_QUAL(allele);
    ADD_QUAL(citation);
    ADD_QUAL(db_xref);
    ADD_QUAL(evidence);
    ADD_QUAL(gene);
    ADD_QUAL(label);
    ADD_QUAL(locus_tag);
    ADD_QUAL(map);
    ADD_QUAL(note);