sequtil_tables.cpp

ncbi源码

    0x81, 0x41,    0x81, 0x42,    0x81, 0x44,    0x81, 0x48,
    0x81, 0x81,    0x81, 0x82,    0x81, 0x84,    0x81, 0x88,
    0x82, 0x11,    0x82, 0x12,    0x82, 0x14,    0x82, 0x18,
    0x82, 0x21,    0x82, 0x22,    0x82, 0x24,    0x82, 0x28,
    0x82, 0x41,    0x82, 0x42,    0x82, 0x44,    0x82, 0x48,
    0x82, 0x81,    0x82, 0x82,    0x82, 0x84,    0x82, 0x88,
    0x84, 0x11,    0x84, 0x12,    0x84, 0x14,    0x84, 0x18,
    0x84, 0x21,    0x84, 0x22,    0x84, 0x24,    0x84, 0x28,
    0x84, 0x41,    0x84, 0x42,    0x84, 0x44,    0x84, 0x48,
    0x84, 0x81,    0x84, 0x82,    0x84, 0x84,    0x84, 0x88,
    0x88, 0x11,    0x88, 0x12,    0x88, 0x14,    0x88, 0x18,
    0x88, 0x21,    0x88, 0x22,    0x88, 0x24,    0x88, 0x28,
    0x88, 0x41,    0x88, 0x42,    0x88, 0x44,    0x88, 0x48,
    0x88, 0x81,    0x88, 0x82,    0x88, 0x84,    0x88, 0x88
};

/*
    static Uint1 convert[4] = { 0x1, 0x2, 0x4, 0x8 };
    for ( base[0] = 0; base[0] < 4; ++base[0] ) {
        for ( base[1] = 0; base[1] < 4; ++base[1] ) {
            for ( base[2] = 0; base[2] < 4; ++base[2] ) {
                for ( base[3] = 0; base[3] < 4; ++base[3] ) {
                    Uint1 index =  (base[0] << 6) | (base[1] << 4) |
                                   (base[2] << 2) | base[3];
                    sm_TableOffset1[index * 3] = 
                        0x0F & convert[base[0]];
                    sm_TableOffset1[index * 3 + 1] =
                        (convert[base[1]] << 4) | convert[base[2]]; 
                    sm_TableOffset1[index * 3 + 2] = 
                        (convert[base[3]] << 4) & 0xF0;
                }
            }
        }
    }
*/
const Uint1 C2naTo4na::scm_Table1[768] = {
    0x1, 0x11, 0x10,  0x1, 0x11, 0x20,  0x1, 0x11, 0x40,  0x1, 0x11, 0x80,
    0x1, 0x12, 0x10,  0x1, 0x12, 0x20,  0x1, 0x12, 0x40,  0x1, 0x12, 0x80,
    0x1, 0x14, 0x10,  0x1, 0x14, 0x20,  0x1, 0x14, 0x40,  0x1, 0x14, 0x80,
    0x1, 0x18, 0x10,  0x1, 0x18, 0x20,  0x1, 0x18, 0x40,  0x1, 0x18, 0x80,
    0x1, 0x21, 0x10,  0x1, 0x21, 0x20,  0x1, 0x21, 0x40,  0x1, 0x21, 0x80,
    0x1, 0x22, 0x10,  0x1, 0x22, 0x20,  0x1, 0x22, 0x40,  0x1, 0x22, 0x80,
    0x1, 0x24, 0x10,  0x1, 0x24, 0x20,  0x1, 0x24, 0x40,  0x1, 0x24, 0x80,
    0x1, 0x28, 0x10,  0x1, 0x28, 0x20,  0x1, 0x28, 0x40,  0x1, 0x28, 0x80,
    0x1, 0x41, 0x10,  0x1, 0x41, 0x20,  0x1, 0x41, 0x40,  0x1, 0x41, 0x80,
    0x1, 0x42, 0x10,  0x1, 0x42, 0x20,  0x1, 0x42, 0x40,  0x1, 0x42, 0x80,
    0x1, 0x44, 0x10,  0x1, 0x44, 0x20,  0x1, 0x44, 0x40,  0x1, 0x44, 0x80,
    0x1, 0x48, 0x10,  0x1, 0x48, 0x20,  0x1, 0x48, 0x40,  0x1, 0x48, 0x80,
    0x1, 0x81, 0x10,  0x1, 0x81, 0x20,  0x1, 0x81, 0x40,  0x1, 0x81, 0x80,
    0x1, 0x82, 0x10,  0x1, 0x82, 0x20,  0x1, 0x82, 0x40,  0x1, 0x82, 0x80,
    0x1, 0x84, 0x10,  0x1, 0x84, 0x20,  0x1, 0x84, 0x40,  0x1, 0x84, 0x80,
    0x1, 0x88, 0x10,  0x1, 0x88, 0x20,  0x1, 0x88, 0x40,  0x1, 0x88, 0x80,
    0x2, 0x11, 0x10,  0x2, 0x11, 0x20,  0x2, 0x11, 0x40,  0x2, 0x11, 0x80,
    0x2, 0x12, 0x10,  0x2, 0x12, 0x20,  0x2, 0x12, 0x40,  0x2, 0x12, 0x80,
    0x2, 0x14, 0x10,  0x2, 0x14, 0x20,  0x2, 0x14, 0x40,  0x2, 0x14, 0x80,
    0x2, 0x18, 0x10,  0x2, 0x18, 0x20,  0x2, 0x18, 0x40,  0x2, 0x18, 0x80,
    0x2, 0x21, 0x10,  0x2, 0x21, 0x20,  0x2, 0x21, 0x40,  0x2, 0x21, 0x80,
    0x2, 0x22, 0x10,  0x2, 0x22, 0x20,  0x2, 0x22, 0x40,  0x2, 0x22, 0x80,
    0x2, 0x24, 0x10,  0x2, 0x24, 0x20,  0x2, 0x24, 0x40,  0x2, 0x24, 0x80,
    0x2, 0x28, 0x10,  0x2, 0x28, 0x20,  0x2, 0x28, 0x40,  0x2, 0x28, 0x80,
    0x2, 0x41, 0x10,  0x2, 0x41, 0x20,  0x2, 0x41, 0x40,  0x2, 0x41, 0x80,
    0x2, 0x42, 0x10,  0x2, 0x42, 0x20,  0x2, 0x42, 0x40,  0x2, 0x42, 0x80,
    0x2, 0x44, 0x10,  0x2, 0x44, 0x20,  0x2, 0x44, 0x40,  0x2, 0x44, 0x80,
    0x2, 0x48, 0x10,  0x2, 0x48, 0x20,  0x2, 0x48, 0x40,  0x2, 0x48, 0x80,
    0x2, 0x81, 0x10,  0x2, 0x81, 0x20,  0x2, 0x81, 0x40,  0x2, 0x81, 0x80,
    0x2, 0x82, 0x10,  0x2, 0x82, 0x20,  0x2, 0x82, 0x40,  0x2, 0x82, 0x80,
    0x2, 0x84, 0x10,  0x2, 0x84, 0x20,  0x2, 0x84, 0x40,  0x2, 0x84, 0x80,
    0x2, 0x88, 0x10,  0x2, 0x88, 0x20,  0x2, 0x88, 0x40,  0x2, 0x88, 0x80,
    0x4, 0x11, 0x10,  0x4, 0x11, 0x20,  0x4, 0x11, 0x40,  0x4, 0x11, 0x80,
    0x4, 0x12, 0x10,  0x4, 0x12, 0x20,  0x4, 0x12, 0x40,  0x4, 0x12, 0x80,
    0x4, 0x14, 0x10,  0x4, 0x14, 0x20,  0x4, 0x14, 0x40,  0x4, 0x14, 0x80,
    0x4, 0x18, 0x10,  0x4, 0x18, 0x20,  0x4, 0x18, 0x40,  0x4, 0x18, 0x80,
    0x4, 0x21, 0x10,  0x4, 0x21, 0x20,  0x4, 0x21, 0x40,  0x4, 0x21, 0x80,
    0x4, 0x22, 0x10,  0x4, 0x22, 0x20,  0x4, 0x22, 0x40,  0x4, 0x22, 0x80,
    0x4, 0x24, 0x10,  0x4, 0x24, 0x20,  0x4, 0x24, 0x40,  0x4, 0x24, 0x80,
    0x4, 0x28, 0x10,  0x4, 0x28, 0x20,  0x4, 0x28, 0x40,  0x4, 0x28, 0x80,
    0x4, 0x41, 0x10,  0x4, 0x41, 0x20,  0x4, 0x41, 0x40,  0x4, 0x41, 0x80,
    0x4, 0x42, 0x10,  0x4, 0x42, 0x20,  0x4, 0x42, 0x40,  0x4, 0x42, 0x80,
    0x4, 0x44, 0x10,  0x4, 0x44, 0x20,  0x4, 0x44, 0x40,  0x4, 0x44, 0x80,
    0x4, 0x48, 0x10,  0x4, 0x48, 0x20,  0x4, 0x48, 0x40,  0x4, 0x48, 0x80,
    0x4, 0x81, 0x10,  0x4, 0x81, 0x20,  0x4, 0x81, 0x40,  0x4, 0x81, 0x80,
    0x4, 0x82, 0x10,  0x4, 0x82, 0x20,  0x4, 0x82, 0x40,  0x4, 0x82, 0x80,
    0x4, 0x84, 0x10,  0x4, 0x84, 0x20,  0x4, 0x84, 0x40,  0x4, 0x84, 0x80,
    0x4, 0x88, 0x10,  0x4, 0x88, 0x20,  0x4, 0x88, 0x40,  0x4, 0x88, 0x80,
    0x8, 0x11, 0x10,  0x8, 0x11, 0x20,  0x8, 0x11, 0x40,  0x8, 0x11, 0x80,
    0x8, 0x12, 0x10,  0x8, 0x12, 0x20,  0x8, 0x12, 0x40,  0x8, 0x12, 0x80,
    0x8, 0x14, 0x10,  0x8, 0x14, 0x20,  0x8, 0x14, 0x40,  0x8, 0x14, 0x80,
    0x8, 0x18, 0x10,  0x8, 0x18, 0x20,  0x8, 0x18, 0x40,  0x8, 0x18, 0x80,
    0x8, 0x21, 0x10,  0x8, 0x21, 0x20,  0x8, 0x21, 0x40,  0x8, 0x21, 0x80,
    0x8, 0x22, 0x10,  0x8, 0x22, 0x20,  0x8, 0x22, 0x40,  0x8, 0x22, 0x80,
    0x8, 0x24, 0x10,  0x8, 0x24, 0x20,  0x8, 0x24, 0x40,  0x8, 0x24, 0x80,
    0x8, 0x28, 0x10,  0x8, 0x28, 0x20,  0x8, 0x28, 0x40,  0x8, 0x28, 0x80,
    0x8, 0x41, 0x10,  0x8, 0x41, 0x20,  0x8, 0x41, 0x40,  0x8, 0x41, 0x80,
    0x8, 0x42, 0x10,  0x8, 0x42, 0x20,  0x8, 0x42, 0x40,  0x8, 0x42, 0x80,
    0x8, 0x44, 0x10,  0x8, 0x44, 0x20,  0x8, 0x44, 0x40,  0x8, 0x44, 0x80,
    0x8, 0x48, 0x10,  0x8, 0x48, 0x20,  0x8, 0x48, 0x40,  0x8, 0x48, 0x80,
    0x8, 0x81, 0x10,  0x8, 0x81, 0x20,  0x8, 0x81, 0x40,  0x8, 0x81, 0x80,
    0x8, 0x82, 0x10,  0x8, 0x82, 0x20,  0x8, 0x82, 0x40,  0x8, 0x82, 0x80,
    0x8, 0x84, 0x10,  0x8, 0x84, 0x20,  0x8, 0x84, 0x40,  0x8, 0x84, 0x80,
    0x8, 0x88, 0x10,  0x8, 0x88, 0x20,  0x8, 0x88, 0x40,  0x8, 0x88, 0x80
};


// NCBI2na to NCBI8na (NCBI4na_expand)
/*
    static Uint1 convert[] = { 0x01, 0x02, 0x04, 0x08 };
    Uint1 base[4];

    for ( base[0] = 0; base[0] < 4; ++(base[0]) ) {
        for ( base[1] = 0; base[1] < 4; ++(base[1]) ) {
            for ( base[2] = 0; base[2] < 4; ++(base[2]) ) {
                for ( base[3] = 0; base[3] < 4; ++(base[3]) ) {
                    Uint1 index = 
                        (base[0] << 6) | (base[1] << 4) | (base[2] << 2) | base[3];
                    for ( size_t i = 0; i < 4; ++i ) {
                        sm_Table[index * 4 + i] = convert[base[i]];
                    }
                }
            }
        }
    }
*/
const Uint1 C2naTo8na::scm_Table[1024] = {
    0x1,0x1,0x1,0x1, 0x1,0x1,0x1,0x2, 0x1,0x1,0x1,0x4, 0x1,0x1,0x1,0x8,
    0x1,0x1,0x2,0x1, 0x1,0x1,0x2,0x2, 0x1,0x1,0x2,0x4, 0x1,0x1,0x2,0x8,
    0x1,0x1,0x4,0x1, 0x1,0x1,0x4,0x2, 0x1,0x1,0x4,0x4, 0x1,0x1,0x4,0x8,
    0x1,0x1,0x8,0x1, 0x1,0x1,0x8,0x2, 0x1,0x1,0x8,0x4, 0x1,0x1,0x8,0x8,
    0x1,0x2,0x1,0x1, 0x1,0x2,0x1,0x2, 0x1,0x2,0x1,0x4, 0x1,0x2,0x1,0x8,
    0x1,0x2,0x2,0x1, 0x1,0x2,0x2,0x2, 0x1,0x2,0x2,0x4, 0x1,0x2,0x2,0x8,
    0x1,0x2,0x4,0x1, 0x1,0x2,0x4,0x2, 0x1,0x2,0x4,0x4, 0x1,0x2,0x4,0x8,
    0x1,0x2,0x8,0x1, 0x1,0x2,0x8,0x2, 0x1,0x2,0x8,0x4, 0x1,0x2,0x8,0x8,
    0x1,0x4,0x1,0x1, 0x1,0x4,0x1,0x2, 0x1,0x4,0x1,0x4, 0x1,0x4,0x1,0x8,
    0x1,0x4,0x2,0x1, 0x1,0x4,0x2,0x2, 0x1,0x4,0x2,0x4, 0x1,0x4,0x2,0x8,
    0x1,0x4,0x4,0x1, 0x1,0x4,0x4,0x2, 0x1,0x4,0x4,0x4, 0x1,0x4,0x4,0x8,
    0x1,0x4,0x8,0x1, 0x1,0x4,0x8,0x2, 0x1,0x4,0x8,0x4, 0x1,0x4,0x8,0x8,
    0x1,0x8,0x1,0x1, 0x1,0x8,0x1,0x2, 0x1,0x8,0x1,0x4, 0x1,0x8,0x1,0x8,
    0x1,0x8,0x2,0x1, 0x1,0x8,0x2,0x2, 0x1,0x8,0x2,0x4, 0x1,0x8,0x2,0x8,
    0x1,0x8,0x4,0x1, 0x1,0x8,0x4,0x2, 0x1,0x8,0x4,0x4, 0x1,0x8,0x4,0x8,
    0x1,0x8,0x8,0x1, 0x1,0x8,0x8,0x2, 0x1,0x8,0x8,0x4, 0x1,0x8,0x8,0x8,
    0x2,0x1,0x1,0x1, 0x2,0x1,0x1,0x2, 0x2,0x1,0x1,0x4, 0x2,0x1,0x1,0x8,
    0x2,0x1,0x2,0x1, 0x2,0x1,0x2,0x2, 0x2,0x1,0x2,0x4, 0x2,0x1,0x2,0x8,
    0x2,0x1,0x4,0x1, 0x2,0x1,0x4,0x2, 0x2,0x1,0x4,0x4, 0x2,0x1,0x4,0x8,
    0x2,0x1,0x8,0x1, 0x2,0x1,0x8,0x2, 0x2,0x1,0x8,0x4, 0x2,0x1,0x8,0x8,
    0x2,0x2,0x1,0x1, 0x2,0x2,0x1,0x2, 0x2,0x2,0x1,0x4, 0x2,0x2,0x1,0x8,
    0x2,0x2,0x2,0x1, 0x2,0x2,0x2,0x2, 0x2,0x2,0x2,0x4, 0x2,0x2,0x2,0x8,
    0x2,0x2,0x4,0x1, 0x2,0x2,0x4,0x2, 0x2,0x2,0x4,0x4, 0x2,0x2,0x4,0x8,
    0x2,0x2,0x8,0x1, 0x2,0x2,0x8,0x2, 0x2,0x2,0x8,0x4, 0x2,0x2,0x8,0x8,
    0x2,0x4,0x1,0x1, 0x2,0x4,0x1,0x2, 0x2,0x4,0x1,0x4, 0x2,0x4,0x1,0x8,
    0x2,0x4,0x2,0x1, 0x2,0x4,0x2,0x2, 0x2,0x4,0x2,0x4, 0x2,0x4,0x2,0x8,
    0x2,0x4,0x4,0x1, 0x2,0x4,0x4,0x2, 0x2,0x4,0x4,0x4, 0x2,0x4,0x4,0x8,
    0x2,0x4,0x8,0x1, 0x2,0x4,0x8,0x2, 0x2,0x4,0x8,0x4, 0x2,0x4,0x8,0x8,
    0x2,0x8,0x1,0x1, 0x2,0x8,0x1,0x2, 0x2,0x8,0x1,0x4, 0x2,0x8,0x1,0x8,
    0x2,0x8,0x2,0x1, 0x2,0x8,0x2,0x2, 0x2,0x8,0x2,0x4, 0x2,0x8,0x2,0x8,
    0x2,0x8,0x4,0x1, 0x2,0x8,0x4,0x2, 0x2,0x8,0x4,0x4, 0x2,0x8,0x4,0x8,
    0x2,0x8,0x8,0x1, 0x2,0x8,0x8,0x2, 0x2,0x8,0x8,0x4, 0x2,0x8,0x8,0x8,
    0x4,0x1,0x1,0x1, 0x4,0x1,0x1,0x2, 0x4,0x1,0x1,0x4, 0x4,0x1,0x1,0x8,
    0x4,0x1,0x2,0x1, 0x4,0x1,0x2,0x2, 0x4,0x1,0x2,0x4, 0x4,0x1,0x2,0x8,
    0x4,0x1,0x4,0x1, 0x4,0x1,0x4,0x2, 0x4,0x1,0x4,0x4, 0x4,0x1,0x4,0x8,
    0x4,0x1,0x8,0x1, 0x4,0x1,0x8,0x2, 0x4,0x1,0x8,0x4, 0x4,0x1,0x8,0x8,
    0x4,0x2,0x1,0x1, 0x4,0x2,0x1,0x2, 0x4,0x2,0x1,0x4, 0x4,0x2,0x1,0x8,
    0x4,0x2,0x2,0x1, 0x4,0x2,0x2,0x2, 0x4,0x2,0x2,0x4, 0x4,0x2,0x2,0x8,
    0x4,0x2,0x4,0x1, 0x4,0x2,0x4,0x2, 0x4,0x2,0x4,0x4, 0x4,0x2,0x4,0x8,
    0x4,0x2,0x8,0x1, 0x4,0x2,0x8,0x2, 0x4,0x2,0x8,0x4, 0x4,0x2,0x8,0x8,
    0x4,0x4,0x1,0x1, 0x4,0x4,0x1,0x2, 0x4,0x4,0x1,0x4, 0x4,0x4,0x1,0x8,
    0x4,0x4,0x2,0x1, 0x4,0x4,0x2,0x2, 0x4,0x4,0x2,0x4, 0x4,0x4,0x2,0x8,
    0x4,0x4,0x4,0x1, 0x4,0x4,0x4,0x2, 0x4,0x4,0x4,0x4, 0x4,0x4,0x4,0x8,
    0x4,0x4,0x8,0x1, 0x4,0x4,0x8,0x2, 0x4,0x4,0x8,0x4, 0x4,0x4,0x8,0x8,
    0x4,0x8,0x1,0x1, 0x4,0x8,0x1,0x2, 0x4,0x8,0x1,0x4, 0x4,0x8,0x1,0x8,
    0x4,0x8,0x2,0x1, 0x4,0x8,0x2,0x2, 0x4,0x8,0x2,0x4, 0x4,0x8,0x2,0x8,
    0x4,0x8,0x4,0x1, 0x4,0x8,0x4,0x2, 0x4,0x8,0x4,0x4, 0x4,0x8,0x4,0x8,
    0x4,0x8,0x8,0x1, 0x4,0x8,0x8,0x2, 0x4,0x8,0x8,0x4, 0x4,0x8,0x8,0x8,
    0x8,0x1,0x1,0x1, 0x8,0x1,0x1,0x2, 0x8,0x1,0x1,0x4, 0x8,0x1,0x1,0x8,
    0x8,0x1,0x2,0x1, 0x8,0x1,0x2,0x2, 0x8,0x1,0x2,0x4, 0x8,0x1,0x2,0x8,
    0x8,0x1,0x4,0x1, 0x8,0x1,0x4,0x2, 0x8,0x1,0x4,0x4, 0x8,0x1,0x4,0x8,
    0x8,0x1,0x8,0x1, 0x8,0x1,0x8,0x2, 0x8,0x1,0x8,0x4, 0x8,0x1,0x8,0x8,
    0x8,0x2,0x1,0x1, 0x8,0x2,0x1,0x2, 0x8,0x2,0x1,0x4, 0x8,0x2,0x1,0x8,
    0x8,0x2,0x2,0x1, 0x8,0x2,0x2,0x2, 0x8,0x2,0x2,0x4, 0x8,0x2,0x2,0x8,
    0x8,0x2,0x4,0x1, 0x8,0x2,0x4,0x2, 0x8,0x2,0x4,0x4, 0x8,0x2,0x4,0x8,
    0x8,0x2,0x8,0x1, 0x8,0x2,0x8,0x2, 0x8,0x2,0x8,0x4, 0x8,0x2,0x8,0x8,
    0x8,0x4,0x1,0x1, 0x8,0x4,0x1,0x2, 0x8,0x4,0x1,0x4, 0x8,0x4,0x1,0x8,
    0x8,0x4,0x2,0x1, 0x8,0x4,0x2,0x2, 0x8,0x4,0x2,0x4, 0x8,0x4,0x2,0x8,
    0x8,0x4,0x4,0x1, 0x8,0x4,0x4,0x2, 0x8,0x4,0x4,0x4, 0x8,0x4,0x4,0x8,
    0x8,0x4,0x8,0x1, 0x8,0x4,0x8,0x2, 0x8,0x4,0x8,0x4, 0x8,0x4,0x8,0x8,
    0x8,0x8,0x1,0x1, 0x8,0x8,0x1,0x2, 0x8,0x8,0x1,0x4, 0x8,0x8,0x1,0x8,
    0x8,0x8,0x2,0x1, 0x8,0x8,0x2,0x2, 0x8,0x8,0x2,0x4, 0x8,0x8,0x2,0x8,
    0x8,0x8,0x4,0x1, 0x8,0x8,0x4,0x2, 0x8,0x8,0x4,0x4, 0x8,0x8,0x4,0x8,
    0x8,0x8,0x8,0x1, 0x8,0x8,0x8,0x2, 0x8,0x8,0x8,0x4, 0x8,0x8,0x8,0x8
};

// NCBI2na_expand to IUPACna
// 0 -> A
// 1 -> C
// 2 -> G
// 3 -> T
const Uint1 C2naExpandToIupacna::scm_Table[256] = {
    0x41, 0x43, 0x47, 0x54, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff,
    0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff, 0xff
};


// NCBI4na to IUPACna
// 0  '-'  -> N
// 1  'A'  -> N
// 2  'C'  -> N
// 3  'M'  -> N
// 4  'G'  -> N
// 5  'R'  -> N
// 6  'S'  -> N
// 7  'V'  -> N
// 8  'T'  -> N
// 9  'W'  -> N
// 10 'Y'  -> N
// 11 'H'  -> N
// 12 'K'  -> N
// 13 'D'  -> N
// 14 'B'  -> N
// 15 'N'  -> N
const Uint1 C4naToIupacna::scm_Table[512] = {
    0x4e,0x4e,    0x4e,0x41,    0x4e,0x43,    0x4e,0x4d,
    0x4e,0x47,    0x4e,0x52,    0x4e,0x53,    0x4e,0x56,
    0x4e,0x54,    0x4e,0x57,    0x4e,0x59,    0x4e,0x48,
    0x4e,0x4b,    0x4e,0x44,    0x4e,0x42,    0x4e,0x4e,
    0x41,0x4e,    0x41,0x41,    0x41,0x43,    0x41,0x4d,
    0x41,0x47,    0x41,0x52,    0x41,0x53,    0x41,0x56,
    0x41,0x54,    0x41,0x57,    0x41,0x59,    0x41,0x48,
    0x41,0x4b,    0x41,0x44,    0x41,0x42,    0x41,0x4e,
    0x43,0x4e,    0x43,0x41,    0x43,0x43,    0x43,0x4d,
    0x43,0x47,    0x43,0x52,    0x43,0x53,    0x43,0x56,
    0x43,0x54,    0x43,0x57,    0x43,0x59,    0x43,0x48,
    0x43,0x4b,    0x43,0x44,    0x43,0x42,    0x43,0x4e,
    0x4d,0x4e,    0x4d,0x41,    0x4d,0x43,    0x4d,0x4d,
    0x4d,0x47,    0x4d,0x52,    0x4d,0x53,    0x4d,0x56,
    0x4d,0x54,    0x4d,0x57,    0x4d,0x59,    0x4d,0x48,
    0x4d,0x4b,    0x4d,0x44,    0x4d,0x42,    0x4d,0x4e,
    0x47,0x4e,    0x47,0x41,    0x47,0x43,    0x47,0x4d,
    0x47,0x47,    0x47,0x52,    0x47,0x53,    0x47,0x56,
    0x47,0x54,    0x47,0x57,    0x47,0x59,    0x47,0x48,
    0x47,0x4b,    0x47,0x44,    0x47,0x42,    0x47,0x4e,
    0x52,0x4e,    0x52,0x41,    0x52,0x43,    0x52,0x4d,
    0x52,0x47,    0x52,0x52,    0x52,0x53,    0x52,0x56,
    0x52,0x54,    0x52,0x57,    0x52,0x59,    0x52,0x48,
    0x52,0x4b,    0x52,0x44,    0x52,0x42,    0x52,0x4e,
    0x53,0x4e,    0x53,0x41,    0x53,0x43,    0x53,0x4d,
    0x53,0x47,    0x53,0x52,    0x53,0x53,    0x53,0x56,
    0x53,0x54,    0x53,0x57,    0x53,0x59,    0x53,0x48,
    0x53,0x4b,    0x53,0x44,    0x53,0x42,    0x53,0x4e,
    0x56,0x4e,    0x56,0x41,    0x56,0x43,    0x56,0x4d,
    0x56,0x47,    0x56,0x52,    0x56,0x53,    0x56,0x56,
    0x56,0x54,    0x56,0x57,    0x56,0x59,    0x56,0x48,
    0x56,0x4b,    0x56,0x44,    0x56,0x42,    0x56,0x4e,
    0x54,0x4e,    0x54,0x41,    0x54,0x43,    0x54,0x4d,
    0x54,0x47,    0x54,0x52,    0x54,0x53,    0x54,0x56,
    0x54,0x54,    0x54,0x57,    0x54,0x59,    0x54,0x48,
    0x54,0x4b,    0x54,0x44,    0x54,0x42,    0x54,0x4e,
    0x57,0x4e,    0x57,0x41,    0x57,0x43,    0x57,0x4d,