linkout.cpp

来自「ncbi源码」· C++ 代码 · 共 153 行

/*
 * ===========================================================================
 * PRODUCTION $Log: linkout.cpp,v $
 * PRODUCTION Revision 1000.4  2004/06/01 20:56:48  gouriano
 * PRODUCTION PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.5
 * PRODUCTION
 * ===========================================================================
 */

/*  $Id: linkout.cpp,v 1000.4 2004/06/01 20:56:48 gouriano Exp $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software / database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software / database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Authors:  Mike DiCuccio
 *
 * File Description:
 *
 */

#include <ncbi_pch.hpp>
#include "linkout.hpp"
#include "utils.hpp"
#include <gui/plugin/PluginInfo.hpp>
#include <gui/plugin/PluginCommand.hpp>
#include <gui/plugin/PluginCommandSet.hpp>
#include <gui/plugin/PluginArgSet.hpp>
#include <gui/plugin/PluginArg.hpp>
#include <gui/plugin/PluginRequest.hpp>
#include <gui/core/version.hpp>
#include <gui/utils/app_popup.hpp>

#include <objmgr/seq_descr_ci.hpp>
#include <objects/seqfeat/Org_ref.hpp>
#include <objects/seqfeat/BioSource.hpp>
#include <objects/seq/Seqdesc.hpp>
#include <objects/seq/Seq_descr.hpp>
#include <objects/seq/Bioseq.hpp>


BEGIN_NCBI_SCOPE
USING_SCOPE(objects);


CConstRef<objects::COrg_ref> GetOrganism(const objects::CBioseq_Handle& handle)
{
    CConstRef<objects::COrg_ref> ref;
    objects::CSeq_descr_CI desc_iter(handle);
    for ( ;  desc_iter  &&  !ref;  ++desc_iter) {
        ITERATE (objects::CBioseq::TDescr::Tdata, iter, desc_iter->Get()) {
            if ((*iter)->Which() == objects::CSeqdesc::e_Org) {
                ref.Reset(&(*iter)->GetOrg());
                break;
            }

            if ((*iter)->Which() == objects::CSeqdesc::e_Source) {
                ref.Reset(&(*iter)->GetSource().GetOrg());
                break;
            }
        }
    }

    return ref;
}




// standard info boilerplate
void CAlgoLinkOut::GetInfo(CPluginInfo& info)
{
    info.Reset();

    // version info macro
    info.SetInfo(CPluginVersion::eMajor, CPluginVersion::eMinor, 0,
                 string(__DATE__) + " " + string(__TIME__),
                 "CAlgoLinkOut", "", "", "");

    // command info
    CPluginCommandSet& cmds = info.SetCommands();
    CPluginCommand&    args = cmds.AddAlgoCommand(eAlgoCommand_run);
    args.AddArgument("app",      "App to run",   CPluginArg::eString);
    args.AddArgument("app_args", "Args for app", CPluginArg::eString);
}


// run our plugin
void CAlgoLinkOut::RunCommand(CPluginMessage& msg)
{
    const CPluginCommand& args = msg.GetRequest().GetCommand();
    CPluginReply& reply = msg.SetReply();

    string app      = args["app"].AsString();
    string app_args = args["app_args"].AsString();

    reply.SetStatus(eMessageStatus_failed);
    if (app == "<browser>") {
        if ( !CAppPopup::PopupURL(app_args) ) {
            LOG_POST(Error << "Cannot launch browser with URL: " << app_args);
        }
        reply.SetStatus(eMessageStatus_success);
    }
}



END_NCBI_SCOPE

/*
 * ===========================================================================
 * $Log: linkout.cpp,v $
 * Revision 1000.4  2004/06/01 20:56:48  gouriano
 * PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.5
 *
 * Revision 1.5  2004/05/21 22:27:47  gorelenk
 * Added PCH ncbi_pch.hpp
 *
 * Revision 1.4  2004/02/27 17:01:19  dicuccio
 * Un-inlined GetOrganism()
 *
 * Revision 1.3  2003/11/24 15:45:31  dicuccio
 * Renamed CVersion to CPluginVersion
 *
 * Revision 1.2  2003/11/04 17:49:24  dicuccio
 * Changed calling parameters for plugins - pass CPluginMessage instead of paired
 * CPluginCommand/CPluginReply
 *
 * Revision 1.1  2003/09/23 19:45:45  dicuccio
 * Initial revision
 *
 * ===========================================================================
 */