blast_poll_table.cpp

来自「ncbi源码」· C++ 代码 · 共 386 行

/*
 * ===========================================================================
 * PRODUCTION $Log: blast_poll_table.cpp,v $
 * PRODUCTION Revision 1000.1  2004/06/01 20:54:14  gouriano
 * PRODUCTION PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.8
 * PRODUCTION
 * ===========================================================================
 */

/*  $Id: blast_poll_table.cpp,v 1000.1 2004/06/01 20:54:14 gouriano Exp $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Authors:  Mike DiCuccio
 *
 * File Description:
 *
 */

#include <ncbi_pch.hpp>
#include "blast_poll_table.hpp"
#include <gui/objutils/label.hpp>
#include <gui/objutils/obj_clipboard.hpp>
#include <gui/utils/gui_event.hpp>
#include <gui/utils/message_box.hpp>
#include <gui/widgets/fl/menu.hpp>
#include <gui/core/view_menu.hpp>
#include <gui/core/doc_manager.hpp>
#include <gui/dialogs/file_browser.hpp>
#include <objmgr/scope.hpp>
#include <serial/serial.hpp>
#include <serial/objostr.hpp>
#include <serial/objistr.hpp>
#include <corelib/ncbireg.hpp>


BEGIN_NCBI_SCOPE
USING_SCOPE(objects);

CBlastPollTable::CBlastPollTable(int x, int y, int w, int h, const char* label)
    : CTablePanel< CRef<CBlastPollItem> >(x, y, w, h, label)
{
    //
    // set up the actual columns for our internal data
    //
    SetColumn(eRid,      "RID",         eString, FL_ALIGN_LEFT,   1.0f);
    SetColumn(eLocation, "Location",    eString, FL_ALIGN_LEFT,   1.0f);
    SetColumn(eStatus,   "Status",      eString, FL_ALIGN_CENTER, 0.5f);
    SetColumn(eSubmit,   "Submitted",   eString, FL_ALIGN_CENTER, 0.5f);
    SetColumn(eLastPoll, "Polled",      eString, FL_ALIGN_CENTER, 0.5f);

    SetCellBox(CFltkUtils::eBox_RightEdge);
}


enum EBlastResultsDlgCommands {
    eCmd_NewDocument = eBaseCmdLast + 200,
    eCmd_NewView,
    eCmd_SaveAs
};


static
DEFINE_MENU(PopupMenu)
    MENU_ITEM(eCmd_NewDocument, "Open in New Document")
    SUBMENU("Open a View")
    END_SUBMENU()
    MENU_SEPARATOR()
    MENU_ITEM(eCmd_SaveAs,      "Save as File")
END_MENU()

BEGIN_CMD_MAP(CBlastPollTable, CCommandTarget)
    ON_COMMAND(eCmd_NewDocument, &CBlastPollTable::OnNewDocument)
    ON_COMMAND(eCmd_SaveAs,      &CBlastPollTable::OnSaveAs)
END_CMD_MAP()



void CBlastPollTable::OnNewDocument()
{
    for (size_t i = 0;  i < GetRows();  ++i) {
        if ( !IsRowSelected(i) ) {
            continue;
        }

        if (GetData(i)->m_Results) {
            CRef<CScope> scope(new CScope(CDocManager::GetObjectManager()));
            scope->AddDefaults();
            CDocManager::CreateDocument(*scope, *GetData(i)->m_Results);
            CDocManager::UpdateAllViews();
        }
    }
}


void CBlastPollTable::OnSaveAs()
{
    for (size_t i = 0;  i < GetRows();  ++i) {
        if ( !IsRowSelected(i) ) {
            continue;
        }

        const CBlastPollItem& item = *GetData(i);
        if (item.m_Results) {
            string fname = NcbiFileBrowser("Save BLAST Results", "", "");
            if (fname.empty()) {
                NcbiMessageBox("Error: No file indicated.");
                continue;
            }

            CNcbiOfstream o_file(fname.c_str(), ios::binary);
            auto_ptr<CObjectOStream> os
                (CObjectOStream::Open(eSerial_AsnBinary, o_file));
            *os << *item.m_Results;
        } else {
            string fname = NcbiFileBrowser("Save BLAST Results", "*.rid", "");
            if (fname.empty()) {
                NcbiMessageBox("Error: No file indicated.");
                continue;
            }

            CNcbiRegistry reg;

            reg.Set("blast-rid", "RID", item.m_Rid,
                    CNcbiRegistry::ePersistent);
            if (item.m_QueryLoc) {
                string loc;
                {{
                    CNcbiOstrstream ostr;
                    auto_ptr<CObjectOStream> os
                        (CObjectOStream::Open(eSerial_AsnText, ostr));
                    *os << *item.m_QueryLoc;
                    os->Flush();
                    loc = CNcbiOstrstreamToString(ostr);
                }}
                loc = NStr::Replace(loc, "\n", "");
                loc = NStr::Replace(loc, "\r", "");
                reg.Set("blast-rid", "QueryLocation", loc,
                        CNcbiRegistry::ePersistent);
            }
            CNcbiOfstream o_file(fname.c_str());
            reg.Write(o_file);
        }
    }
}


void CBlastPollTable::OnShowPopup()
{
    CPopupMenu menu(x(), y(), w(), h());
    menu.SetCmdTarget(static_cast<CCommandTarget*>(this));
    add(&menu);

    menu.SetItems(PopupMenu);

    CViewMenuMgr mgr(&menu, "Open a View", this);
    mgr.AddNewViews();

    menu.popup(); 
    remove(menu);
}


int CBlastPollTable::handle(int event)
{
    int res = CTablePanel< CRef<CBlastPollItem> >::handle(event);
    if (res) {
        return res;
    }

    switch (m_Handler.GetGUISignal()) {
    case CGUIEvent::ePopupSignal:
        OnShowPopup();
        return 1;

    default:
        break;
    }

    return 0;
}


int CBlastPollTable::x_OnCopy()
{
    string str;
    CClipboard::Clear();

    for (size_t i = 0;  i < GetRows();  ++i) {
        if ( !IsRowSelected(i) ) {
            continue;
        }

        if (GetData(i)->m_Results) {
            CObjClipboard::Add(GetData(i)->m_Document->GetScope(),
                               *GetData(i)->m_Results);
        } else {
            CClipboard::Add(GetData(i)->m_Rid);
        }
    }

    CClipboard::Copy();
    return 1;
}


// add an item to the table
void CBlastPollTable::AddItem(CBlastPollItem& item)
{
    size_t idx = AddRow();
    SetData(idx, CRef<CBlastPollItem>(&item));
    x_UpdateItem(idx);
}


void CBlastPollTable::ActivateItem(size_t idx)
{
    SetData(idx)->m_Active = true;
    x_UpdateItem(GetData(idx));
}


void CBlastPollTable::DeactivateItem(size_t idx)
{
    SetData(idx)->m_Active = false;
    x_UpdateItem(GetData(idx));
}


// remove an item from the table
void CBlastPollTable::RemoveItem(size_t idx)
{
    RemoveRow(idx);
    redraw();
}


// remove all selected items from the table
void CBlastPollTable::RemoveSelected()
{
    for (size_t i = GetRows() - 1;  i >= 0;  --i) {
        if ( !IsRowSelected(i) ) {
            continue;
        }
        
        RemoveRow(i);
    }
}


void CBlastPollTable::MoveUp(size_t idx)
{
}


void CBlastPollTable::MoveDown(size_t idx)
{
}


// update an item in the table
void CBlastPollTable::UpdateItem(size_t idx, CBlastPollItem& item)
{
    _ASSERT(idx < GetRows());
    SetData(idx, CRef<CBlastPollItem>(&item));

    x_UpdateItem(idx);
}


bool CBlastPollTable::HasRid(const string& rid) const
{
    for (size_t i = 0;  i < GetRows();  ++i) {
        if (GetData(i)->m_Rid == rid) {
            return true;
        }
    }

    return false;
}


void CBlastPollTable::GetSelections(TConstScopedObjects& objs) const
{
    objs.clear();
    for (size_t i = 0;  i < GetRows();  ++i) {
        if ( !IsRowSelected(i) ) {
            continue;
        }

        const CBlastPollItem& item = *GetData(i);
        if ( !item.m_Document  ||  !item.m_Results ) {
            continue;
        }

        SConstScopedObject sco;
        sco.scope  = &item.m_Document->GetScope();
        sco.object = item.m_Results.GetPointer();
        objs.push_back(sco);
    }
}


void CBlastPollTable::SetSelections(const TConstScopedObjects& objs)
{
}


void CBlastPollTable::x_UpdateItem(size_t idx)
{
    const CBlastPollItem& item = *GetData(idx);
    SetCell(idx, eRid,      item.m_Rid);
    if (item.m_QueryLoc) {
        string& str = SetCell(idx, eLocation);
        str.erase();
        CScope* scope = NULL;
        if (item.m_Document) {
            scope = &item.m_Document->GetScope();
        }
        CLabel::GetLabel(*item.m_QueryLoc, &str, CLabel::eDefault, scope);
    }
    SetCell(idx, eStatus,   item.m_Status);
    SetCell(idx, eSubmit,   item.m_SubmitTime.AsString("h:m:s"));
    SetCell(idx, eLastPoll, item.m_LastPollTime.AsString("h:m:s"));
    redraw();
}


END_NCBI_SCOPE


/*
 * ===========================================================================
 * $Log: blast_poll_table.cpp,v $
 * Revision 1000.1  2004/06/01 20:54:14  gouriano
 * PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.8
 *
 * Revision 1.8  2004/05/28 15:03:20  dicuccio
 * Use right edge box type
 *
 * Revision 1.7  2004/05/21 22:27:46  gorelenk
 * Added PCH ncbi_pch.hpp
 *
 * Revision 1.6  2004/05/07 15:42:08  dicuccio
 * Use CLabel instead of CSeqUtils::GetLabel().  Use CObjClipboard instead of
 * CClipboard
 *
 * Revision 1.5  2004/05/03 13:05:42  dicuccio
 * gui/utils --> gui/objutils where needed
 *
 * Revision 1.4  2004/04/22 13:07:10  dicuccio
 * Really pass selections through in GetSelections()
 *
 * Revision 1.3  2004/04/22 12:22:08  dicuccio
 * Added BLAST RID caching.  Added better formatting for BLAST results
 *
 * Revision 1.2  2004/04/07 12:52:18  dicuccio
 * Added copying of seq-align-set to clipboard, if present
 *
 * Revision 1.1  2004/03/05 17:30:34  dicuccio
 * Initial revision
 *
 * ===========================================================================
 */