find_orfs.hpp

来自「ncbi源码」· HPP 代码 · 共 103 行

/*
 * ===========================================================================
 * PRODUCTION $Log: find_orfs.hpp,v $
 * PRODUCTION Revision 1000.2  2004/04/12 19:29:10  gouriano
 * PRODUCTION PRODUCTION: UPGRADED [CATCHUP_003] Dev-tree R1.5
 * PRODUCTION
 * ===========================================================================
 */

#ifndef GUI_PLUGINS_ALGO_BASIC___FIND_ORFS__HPP
#define GUI_PLUGINS_ALGO_BASIC___FIND_ORFS__HPP

/*  $Id: find_orfs.hpp,v 1000.2 2004/04/12 19:29:10 gouriano Exp $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Authors:  Josh Cherry
 *
 * File Description:  simple gbench plugin for finding ORFs
 *
 */


#include <gui/core/algo.hpp>
#include <gui/dialogs/col/multi_col_dlg.hpp>


BEGIN_NCBI_SCOPE

class CAlgoPlugin_FindOrfs : public CAlgorithm<CAlgoPlugin_FindOrfs>
{
public:
    CAlgoPlugin_FindOrfs() { }
    ~CAlgoPlugin_FindOrfs();

    void RunCommand(objects::CPluginMessage& msg);

    // standard info boilerplate
    static void GetInfo(objects::CPluginInfo& info);

private:
    auto_ptr<CMultiColDlg> m_Dialog;

    // helper function for decoding argument
    int x_DecodeGeneticCode(const string& s);

    CAlgoPlugin_FindOrfs(const CAlgoPlugin_FindOrfs&);
    CAlgoPlugin_FindOrfs& operator=(const CAlgoPlugin_FindOrfs&);
};

END_NCBI_SCOPE



/*
 * ===========================================================================
 * $Log: find_orfs.hpp,v $
 * Revision 1000.2  2004/04/12 19:29:10  gouriano
 * PRODUCTION: UPGRADED [CATCHUP_003] Dev-tree R1.5
 *
 * Revision 1.5  2004/01/28 18:54:20  ucko
 * Include full dialog declarations for GCC 2.95's auto_ptr<>.
 *
 * Revision 1.4  2004/01/27 18:37:43  dicuccio
 * Code clean-up.  Use standard names for plugins.  Removed unnecessary #includes
 *
 * Revision 1.3  2003/11/04 17:49:23  dicuccio
 * Changed calling parameters for plugins - pass CPluginMessage instead of paired
 * CPluginCommand/CPluginReply
 *
 * Revision 1.2  2003/08/19 18:36:59  jcherry
 * Allowed user to specify genetic code
 *
 * Revision 1.1  2003/08/14 17:59:22  jcherry
 * Initial version
 *
 * ===========================================================================
 */


#endif  // GUI_PLUGINS_ALGO_BASIC___FIND_ORFS__HPP