gc_content.hpp

来自「ncbi源码」· HPP 代码 · 共 153 行

/*
 * ===========================================================================
 * PRODUCTION $Log: gc_content.hpp,v $
 * PRODUCTION Revision 1000.2  2004/04/12 19:29:16  gouriano
 * PRODUCTION PRODUCTION: UPGRADED [CATCHUP_003] Dev-tree R1.17
 * PRODUCTION
 * ===========================================================================
 */

#ifndef GUI_PLUGINS_ALGO_BASIC___GC_CONTENT__HPP
#define GUI_PLUGINS_ALGO_BASIC___GC_CONTENT__HPP

/*  $Id: gc_content.hpp,v 1000.2 2004/04/12 19:29:16 gouriano Exp $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Authors:  Mike DiCuccio
 *
 * File Description:
 *    CGcContent -- implements the algorithm to calculate GC composition
 */

#include <gui/core/algo.hpp>
#include <gui/dialogs/col/multi_col_dlg.hpp>

BEGIN_NCBI_SCOPE


class CAlgoPlugin_GcContent : public CAlgorithm<CAlgoPlugin_GcContent>
{
public:
    CAlgoPlugin_GcContent() { }
    ~CAlgoPlugin_GcContent();

    void RunCommand(objects::CPluginMessage& msg);

    // standard info boilerplate
    static void GetInfo(objects::CPluginInfo& info);

private:
    auto_ptr<CMultiColDlg> m_Dialog;

    CAlgoPlugin_GcContent(const CAlgoPlugin_GcContent&);
    CAlgoPlugin_GcContent& operator=(const CAlgoPlugin_GcContent&);
};


END_NCBI_SCOPE



/*
 * ===========================================================================
 * $Log: gc_content.hpp,v $
 * Revision 1000.2  2004/04/12 19:29:16  gouriano
 * PRODUCTION: UPGRADED [CATCHUP_003] Dev-tree R1.17
 *
 * Revision 1.17  2004/01/28 18:54:20  ucko
 * Include full dialog declarations for GCC 2.95's auto_ptr<>.
 *
 * Revision 1.16  2004/01/27 18:37:45  dicuccio
 * Code clean-up.  Use standard names for plugins.  Removed unnecessary #includes
 *
 * Revision 1.15  2003/11/04 17:49:23  dicuccio
 * Changed calling parameters for plugins - pass CPluginMessage instead of paired
 * CPluginCommand/CPluginReply
 *
 * Revision 1.14  2003/08/05 17:03:55  dicuccio
 * Made multi-column output dialog a member variable - allows non-modal operation
 *
 * Revision 1.13  2003/07/28 11:51:48  dicuccio
 * Rewrote CTablePanel<> to be more flexible and better contained.  Added standard
 * multicolumn list dialog.  Deprecated use of COutputDlg.
 *
 * Revision 1.12  2003/07/14 11:12:34  shomrat
 * Plugin messageing system related changes
 *
 * Revision 1.11  2003/07/08 13:13:11  dicuccio
 * +<memory> for auto_ptr<>
 *
 * Revision 1.10  2003/07/02 14:37:05  dicuccio
 * Fixed USING_SCOPE() for brain-dead MSVC.
 *
 * Revision 1.9  2003/07/01 23:05:54  dicuccio
 * Compiler fixes for MSVC
 *
 * Revision 1.8  2003/06/20 14:52:36  dicuccio
 * Revised plugin registration - moved GetInfo() into the plugin handler
 *
 * Revision 1.7  2003/06/02 16:06:21  dicuccio
 * Rearranged src/objects/ subtree.  This includes the following shifts:
 *     - src/objects/asn2asn --> arc/app/asn2asn
 *     - src/objects/testmedline --> src/objects/ncbimime/test
 *     - src/objects/objmgr --> src/objmgr
 *     - src/objects/util --> src/objmgr/util
 *     - src/objects/alnmgr --> src/objtools/alnmgr
 *     - src/objects/flat --> src/objtools/flat
 *     - src/objects/validator --> src/objtools/validator
 *     - src/objects/cddalignview --> src/objtools/cddalignview
 * In addition, libseq now includes six of the objects/seq... libs, and libmmdb
 * replaces the three libmmdb? libs.
 *
 * Revision 1.6  2003/02/24 13:03:15  dicuccio
 * Renamed classes in plugin spec:
 *     CArgSeg --> CPluginArgSet
 *     CArgument --> CPluginArg
 *     CPluginArgs --> CPluginCommand
 *     CPluginCommands --> CPluginCommandSet
 *
 * Revision 1.5  2003/02/20 19:49:53  dicuccio
 * Created new plugin architecture, based on ASN.1 spec.  Moved GBENCH frameowrk
 * over to use new plugin architecture.
 *
 * Revision 1.4  2003/02/05 19:47:23  dicuccio
 * Fixed memory leak with output dialog.  Changed ambiguous 'R' to 'S' for G+C
 *
 * Revision 1.3  2003/01/13 13:10:05  dicuccio
 * Namespace clean-up.  Retired namespace gui -> converted all to namespace ncbi.
 * Moved all FLUID-generated code into namespace ncbi.
 *
 * Revision 1.2  2002/12/30 17:21:40  ostell
 * Added support for most document type selections. Changed labels to use Labelxxx functions.
 *
 * Revision 1.1  2002/11/05 20:59:20  dicuccio
 * Initial revision
 *
 * ===========================================================================
 */


#endif  // GUI_PLUGINS_ALGO_BASIC___GC_CONTENT__HPP