objistr.hpp

ncbi源码

* in parent classes CObjectIStream and CObjectOStream to avoid
* pure virtual method call in destructors.
*
* Revision 1.95  2003/11/19 15:42:09  vasilche
* Added CObjectIStream::HaveMoreData().
*
* Revision 1.94  2003/11/13 14:06:45  gouriano
* Elaborated data verification on read/write/get to enable skipping mandatory class data members
*
* Revision 1.93  2003/10/21 21:08:45  grichenk
* Fixed aliases-related bug in XML stream
*
* Revision 1.92  2003/09/30 16:10:34  vasilche
* Added one more variant of object streams creation.
*
* Revision 1.91  2003/09/25 12:39:08  kuznets
* Added dllexport for CStreamDelayBufferGuard
*
* Revision 1.90  2003/09/24 20:55:13  kuznets
* Implemented CStreamDelayBufferGuard
*
* Revision 1.89  2003/09/16 14:49:15  gouriano
* Enhanced AnyContent objects to support XML namespaces and attribute info items.
*
* Revision 1.88  2003/09/10 20:57:23  gouriano
* added possibility to ignore missing mandatory members on reading
*
* Revision 1.87  2003/08/26 19:24:48  gouriano
* added possibility to discard a member of an STL container
* (from a read hook)
*
* Revision 1.86  2003/08/19 18:32:37  vasilche
* Optimized reading and writing strings.
* Avoid string reallocation when checking char values.
* Try to reuse old string data when string reference counting is not working.
*
* Revision 1.85  2003/08/13 15:47:02  gouriano
* implemented serialization of AnyContent objects
*
* Revision 1.84  2003/07/29 18:47:46  vasilche
* Fixed thread safeness of object stream hooks.
*
* Revision 1.83  2003/05/22 20:08:41  gouriano
* added UTF8 strings
*
* Revision 1.82  2003/05/15 17:45:25  gouriano
* added GetStreamOffset method
*
* Revision 1.81  2003/04/15 16:18:20  siyan
* Added doxygen support
*
* Revision 1.80  2003/03/10 18:52:37  gouriano
* use new structured exceptions (based on CException)
*
* Revision 1.79  2003/01/28 15:26:23  vasilche
* Added low level CObjectIStream::EndDelayBuffer(void);
*
* Revision 1.78  2002/12/23 18:38:51  dicuccio
* Added WIn32 export specifier: NCBI_XSERIAL_EXPORT.
* Moved all CVS logs to the end.
*
* Revision 1.77  2002/12/13 21:51:05  gouriano
* corrected reading of choices
*
* Revision 1.76  2002/12/12 21:10:26  gouriano
* implemented handling of complex XML containers
*
* Revision 1.75  2002/11/14 20:49:52  gouriano
* added BeginChoice/EndChoice methods
*
* Revision 1.74  2002/11/04 21:28:59  grichenk
* Fixed usage of const CRef<> and CRef<> constructor
*
* Revision 1.73  2002/10/25 14:49:29  vasilche
* NCBI C Toolkit compatibility code extracted to libxcser library.
* Serial streams flags names were renamed to fXxx.
*
* Names of flags
*
* Revision 1.72  2002/10/15 13:45:15  gouriano
* added "UndoClassMember" function
*
* Revision 1.71  2002/09/09 18:13:59  grichenk
* Added CObjectHookGuard class.
* Added methods to be used by hooks for data
* reading and skipping.
*
* Revision 1.70  2001/10/17 20:41:19  grichenk
* Added CObjectOStream::CharBlock class
*
* Revision 1.69  2001/07/17 14:52:39  kholodov
* Fixed: replaced int argument by size_t in CheckVisibleChar() and
* ReplaceVisibleChar to avoid truncation in 64 bit mode.
*
* Revision 1.68  2001/06/11 14:34:55  grichenk
* Added support for numeric tags in ASN.1 specifications and data streams.
*
* Revision 1.67  2001/06/07 17:12:46  grichenk
* Redesigned checking and substitution of non-printable characters
* in VisibleString
*
* Revision 1.66  2001/05/17 14:59:11  lavr
* Typos corrected
*
* Revision 1.65  2001/05/16 17:55:33  grichenk
* Redesigned support for non-blocking stream read operations
*
* Revision 1.64  2001/05/11 20:41:11  grichenk
* Added support for non-blocking stream reading
*
* Revision 1.63  2001/01/05 20:10:35  vasilche
* CByteSource, CIStrBuffer, COStrBuffer, CLightString, CChecksum, CWeakMap
* were moved to util.
*
* Revision 1.62  2001/01/05 13:57:18  vasilche
* Fixed overloaded method ambiguity on Mac.
*
* Revision 1.61  2000/12/26 22:23:44  vasilche
* Fixed errors of compilation on Mac.
*
* Revision 1.60  2000/12/26 17:26:09  vasilche
* Added one more Read() interface method.
*
* Revision 1.59  2000/12/15 21:28:46  vasilche
* Moved some typedefs/enums from corelib/ncbistd.hpp.
* Added flags to CObjectIStream/CObjectOStream: eFlagAllowNonAsciiChars.
* TByte typedef replaced by Uint1.
*
* Revision 1.58  2000/12/15 15:37:59  vasilche
* Added support of Int8 and long double.
* Enum values now have type Int4 instead of long.
*
* Revision 1.57  2000/10/20 19:29:15  vasilche
* Adapted for MSVC which doesn't like explicit operator templates.
*
* Revision 1.56  2000/10/20 15:51:26  vasilche
* Fixed data error processing.
* Added interface for constructing container objects directly into output stream.
* object.hpp, object.inl and object.cpp were split to
* objectinfo.*, objecttype.*, objectiter.* and objectio.*.
*
* Revision 1.55  2000/10/17 18:45:24  vasilche
* Added possibility to turn off object cross reference detection in
* CObjectIStream and CObjectOStream.
*
* Revision 1.54  2000/10/13 20:59:12  vasilche
* Avoid using of ssize_t absent on some compilers.
*
* Revision 1.53  2000/10/13 20:22:46  vasilche
* Fixed warnings on 64 bit compilers.
* Fixed missing typename in templates.
*
* Revision 1.52  2000/10/13 16:28:31  vasilche
* Reduced header dependency.
* Avoid use of templates with virtual methods.
* Reduced amount of different maps used.
* All this lead to smaller compiled code size (libraries and programs).
*
* Revision 1.51  2000/10/03 17:22:34  vasilche
* Reduced header dependency.
* Reduced size of debug libraries on WorkShop by 3 times.
* Fixed tag allocation for parent classes.
* Fixed CObject allocation/deallocation in streams.
* Moved instantiation of several templates in separate source file.
*
* Revision 1.50  2000/09/29 16:18:13  vasilche
* Fixed binary format encoding/decoding on 64 bit compulers.
* Implemented CWeakMap<> for automatic cleaning map entries.
* Added cleaning local hooks via CWeakMap<>.
* Renamed ReadTypeName -> ReadFileHeader, ENoTypeName -> ENoFileHeader.
* Added some user interface methods to CObjectIStream, CObjectOStream and
* CObjectStreamCopier.
*
* Revision 1.49  2000/09/18 20:00:04  vasilche
* Separated CVariantInfo and CMemberInfo.
* Implemented copy hooks.
* All hooks now are stored in CTypeInfo/CMemberInfo/CVariantInfo.
* Most type specific functions now are implemented via function pointers instead of virtual functions.
*
* Revision 1.48  2000/09/01 13:16:00  vasilche
* Implemented class/container/choice iterators.
* Implemented CObjectStreamCopier for copying data without loading into memory.
*
* Revision 1.47  2000/08/15 19:44:40  vasilche
* Added Read/Write hooks:
* CReadObjectHook/CWriteObjectHook for objects of specified type.
* CReadClassMemberHook/CWriteClassMemberHook for specified members.
* CReadChoiceVariantHook/CWriteChoiceVariant for specified choice variants.
* CReadContainerElementHook/CWriteContainerElementsHook for containers.
*
* Revision 1.46  2000/07/03 18:42:35  vasilche
* Added interface to typeinfo via CObjectInfo and CConstObjectInfo.
* Reduced header dependency.
*
* Revision 1.45  2000/06/16 20:01:20  vasilche
* Avoid use of unexpected_exception() which is unimplemented on Mac.
*
* Revision 1.44  2000/06/16 16:31:06  vasilche
* Changed implementation of choices and classes info to allow use of the same classes in generated and user written classes.
*
* Revision 1.43  2000/06/07 19:45:42  vasilche
* Some code cleaning.
* Macros renaming in more clear way.
* BEGIN_NAMED_*_INFO, ADD_*_MEMBER, ADD_NAMED_*_MEMBER.
*
* Revision 1.42  2000/06/01 19:06:56  vasilche
* Added parsing of XML data.
*
* Revision 1.41  2000/05/24 20:08:13  vasilche
* Implemented XML dump.
*
* Revision 1.40  2000/05/09 16:38:33  vasilche
* CObject::GetTypeInfo now moved to CObjectGetTypeInfo::GetTypeInfo to reduce possible errors.
* Added write context to CObjectOStream.
* Inlined most of methods of helping class Member, Block, ByteBlock etc.
*
* Revision 1.39  2000/05/04 16:22:23  vasilche
* Cleaned and optimized blocks and members.
*
* Revision 1.38  2000/04/28 16:58:02  vasilche
* Added classes CByteSource and CByteSourceReader for generic reading.
* Added delayed reading of choice variants.
*
* Revision 1.37  2000/04/13 14:50:17  vasilche
* Added CObjectIStream::Open() and CObjectOStream::Open() for easier use.
*
* Revision 1.36  2000/04/06 16:10:50  vasilche
* Fixed bug with iterators in choices.
* Removed unneeded calls to ReadExternalObject/WriteExternalObject.
* Added output buffering to text ASN.1 data.
*
* Revision 1.35  2000/03/14 14:43:29  vasilche
* Fixed error reporting.
*
* Revision 1.34  2000/03/07 14:05:30  vasilche
* Added stream buffering to ASN.1 binary input.
* Optimized class loading/storing.
* Fixed bugs in processing OPTIONAL fields.
*
* Revision 1.33  2000/01/10 20:04:07  vasilche
* Fixed duplicate name.
*
* Revision 1.32  2000/01/10 19:46:31  vasilche
* Fixed encoding/decoding of REAL type.
* Fixed encoding/decoding of StringStore.
* Fixed encoding/decoding of NULL type.
* Fixed error reporting.
* Reduced object map (only classes).
*
* Revision 1.31  2000/01/05 19:43:44  vasilche
* Fixed error messages when reading from ASN.1 binary file.
* Fixed storing of integers with enumerated values in ASN.1 binary file.
* Added TAG support to key/value of map.
* Added support of NULL variant in CHOICE.
*
* Revision 1.30  1999/12/20 15:29:31  vasilche
* Fixed bug with old ASN structures.
*
* Revision 1.29  1999/12/17 19:04:53  vasilche
* Simplified generation of GetTypeInfo methods.
*
* Revision 1.28  1999/10/18 20:11:15  vasilche
* Enum values now have long type.
* Fixed template generation for enums.
*
* Revision 1.27  1999/10/04 16:22:08  vasilche
* Fixed bug with old ASN.1 structures.
*
* Revision 1.26  1999/09/27 14:17:59  vasilche
* Fixed bug with overloaded constructors of Block.
*
* Revision 1.25  1999/09/24 18:19:13  vasilche
* Removed dependency on NCBI toolkit.
*
* Revision 1.24  1999/09/23 18:56:51  vasilche
* Fixed bugs with overloaded methods in objistr*.hpp & objostr*.hpp
*
* Revision 1.23  1999/09/22 20:11:48  vasilche
* Modified for compilation on IRIX native c++ compiler.
*
* Revision 1.22  1999/09/14 18:54:03  vasilche
* Fixed bugs detected by gcc & egcs.
* Removed unneeded includes.
*
* Revision 1.21  1999/08/16 16:07:43  vasilche
* Added ENUMERATED type.
*
* Revision 1.20  1999/08/13 15:53:43  vasilche
* C++ analog of asntool: datatool
*
* Revision 1.19  1999/07/26 18:31:28  vasilche
* Implemented skipping of unused values.
* Added more useful error report.
*
* Revision 1.18  1999/07/22 20:36:37  vasilche
* Fixed 'using namespace' declaration for MSVC.
*
* Revision 1.17  1999/07/22 17:33:40  vasilche
* Unified reading/writing of objects in all three formats.
*
* Revision 1.16  1999/07/21 14:19:55  vasilche
* Added serialization of bool.
*
* Revision 1.15  1999/07/19 15:50:15  vasilche
* Added interface to old ASN.1 routines.
* Added naming of key/value in STL map.
*
* Revision 1.14  1999/07/15 16:54:42  vasilche
* Implemented vector<X> & vector<char> as special case.
*
* Revision 1.13  1999/07/09 16:32:53  vasilche
* Added OCTET STRING write/read.
*
* Revision 1.12  1999/07/07 21:15:03  vasilche
* Cleaned processing of string types (string, char*, const char*).
*
* Revision 1.11  1999/07/02 21:31:43  vasilche
* Implemented reading from ASN.1 binary format.
*
* Revision 1.10  1999/07/01 17:55:19  vasilche
* Implemented ASN.1 binary write.
*
* Revision 1.9  1999/06/30 16:04:27  vasilche
* Added support for old ASN.1 structures.
*
* Revision 1.8  1999/06/24 14:44:39  vasilche
* Added binary ASN.1 output.
*
* Revision 1.7  1999/06/17 20:42:00  vasilche
* Fixed storing/loading of pointers.
*
* Revision 1.6  1999/06/16 20:35:21  vasilche
* Cleaned processing of blocks of data.
* Added input from ASN.1 text format.
*
* Revision 1.5  1999/06/15 16:20:01  vasilche
* Added ASN.1 object output stream.
*
* Revision 1.4  1999/06/10 21:06:38  vasilche
* Working binary output and almost working binary input.
*
* Revision 1.3  1999/06/07 19:30:15  vasilche
* More bug fixes
*
* Revision 1.2  1999/06/04 20:51:32  vasilche
* First compilable version of serialization.
*
* Revision 1.1  1999/05/19 19:56:24  vasilche
* Commit just in case.
*
* ===========================================================================
*/