alnvec_multi_model.hpp

ncbi源码

/*
 * ===========================================================================
 * PRODUCTION $Log: alnvec_multi_model.hpp,v $
 * PRODUCTION Revision 1000.0  2004/04/12 18:23:19  gouriano
 * PRODUCTION PRODUCTION: IMPORTED [CATCHUP_003] Dev-tree R1.4
 * PRODUCTION
 * ===========================================================================
 */

#ifndef GUI_WIDGETS_ALNMULTI___ALNVEC_MULTI_MODEL__HPP
#define GUI_WIDGETS_ALNMULTI___ALNVEC_MULTI_MODEL__HPP

/*  $Id: alnvec_multi_model.hpp,v 1000.0 2004/04/12 18:23:19 gouriano Exp $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Authors:  Andrey Yazhuk
 *
 * File Description:
 *  
 */

#include <corelib/ncbistl.hpp>
#include <corelib/ncbistd.hpp>
#include <corelib/ncbiobj.hpp>

#include <gui/widgets/aln_multiple/alnmulti_model.hpp>
#include <gui/widgets/aln_multiple/align_row.hpp>
#include <gui/widgets/aln_multiple/aln_scoring.hpp>
#include <gui/widgets/aln_multiple/alnvec_multi_ds.hpp>


BEGIN_NCBI_SCOPE


////////////////////////////////////////////////////////////////////////////////
/// CAlnVecMultiModel - extension of CAlnMultiModel. Represents alignment model 
/// for CAlnVec-based alignments and supports sequence-based scoring.

class NCBI_GUIWIDGETS_ALNMULTIPLE_EXPORT CAlnVecMultiModel : public CAlnMultiModel
{
public:
    CAlnVecMultiModel();
    ~CAlnVecMultiModel();

    virtual void SetDataSource(IAlnMultiDataSource* p_ds);
    
    virtual void    SetMasterRow(TNumrow new_row);
    
    /// @name Scoring Methods management functions
    /// @{
    typedef list<IScoringMethod*>    TMethods;
    
    //call this method before SetDataSource
    void    EnableScoring(bool b_en);

    bool    AddScoringMethod(IScoringMethod* method);
    const   TMethods&        GetMethods();

    bool    SetCurrentMethod(const string& name);
    const IScoringMethod*    GetCurrentMethod() const;
    /// @}

    CAlnVecRow*     SetAlnVecRow(TNumrow row)
    {
        return dynamic_cast<CAlnVecRow*>(GetRow(row));
    }
protected:    
    inline CAlnVecMultiDataSource*  x_GetAlnVecDS()
    {
        return dynamic_cast<CAlnVecMultiDataSource*>(m_pDataSource);
    }
    // factory method for creation IAlignRow instances
    virtual IAlignRow*  x_CreateRow(TNumrow row);
    
    virtual void    x_UpdateOnDataChanged(); 
    virtual void    x_UpdateOnCoordsChanged();
    
protected:
    bool    m_bEnableScoring;
    TMethods        m_Methods;  /// registered scoring methods
    CScoreCache     m_ScoreCache;    
};

END_NCBI_SCOPE


#endif  // GUI_WIDGETS_ALNMULTI___ALNVEC_MULTI_MODEL__HPP

/*
 * ===========================================================================
 * $Log: alnvec_multi_model.hpp,v $
 * Revision 1000.0  2004/04/12 18:23:19  gouriano
 * PRODUCTION: IMPORTED [CATCHUP_003] Dev-tree R1.4
 *
 * Revision 1.4  2004/04/02 16:26:41  yazhuk
 * Replaced UpdateOnCoordsChanged() with x_UpdateOnCoordsChanged(); added
 * SetMasterRow(TNumrow)
 *
 * Revision 1.3  2004/03/24 19:18:06  yazhuk
 * Introduced scoring enabling/disabling
 *
 * Revision 1.2  2004/03/18 17:05:58  yazhuk
 * Redesigned Scoring Methods API
 *
 * Revision 1.1  2004/03/17 17:20:52  yazhuk
 * Initial revision; factored out from CAlnVecMultiWidget
 *
 * ===========================================================================
 */