features_panel_ir.hpp

ncbi源码

/*
 * ===========================================================================
 * PRODUCTION $Log: features_panel_ir.hpp,v $
 * PRODUCTION Revision 1000.2  2004/06/01 19:53:18  gouriano
 * PRODUCTION PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.14
 * PRODUCTION
 * ===========================================================================
 */

#ifndef GUI_WIDGET_SEQ_GRAPHICS___FEATURES_PANEL_IR__HPP
#define GUI_WIDGET_SEQ_GRAPHICS___FEATURES_PANEL_IR__HPP

/*  $Id: features_panel_ir.hpp,v 1000.2 2004/06/01 19:53:18 gouriano Exp $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Authors:  Vlad Lebedev
 *
 */


#include <gui/gui.hpp>
#include <objmgr/bioseq_handle.hpp>
#include <gui/widgets/gl/irenderable.hpp>
#include <gui/widgets/gl/ipolicy.hpp>
#include <gui/widgets/seq_graphic/ilayoutpolicy.hpp>

#include <gui/opengl/glbitmapfont.hpp>

#include <gui/objutils/feature.hpp>
#include <gui/objutils/alignment.hpp>
#include <gui/objutils/graph.hpp>
#include <gui/objutils/comment.hpp>
#include <gui/objutils/prot_product.hpp>
#include <gui/objutils/utils.hpp>
#include <gui/objutils/feat_label.hpp>
#include <gui/objutils/label.hpp>

#include <gui/widgets/seq_graphic/seqgraphic_conf.hpp>

#include <objmgr/util/feature.hpp>
#include <objects/seq/Seq_annot.hpp>

BEGIN_NCBI_SCOPE


class NCBI_GUIWIDGETS_SEQGRAPHIC_EXPORT CFeaturesPanelIR : public IRenderable
{
public:
    
    CFeaturesPanelIR();
    virtual ~CFeaturesPanelIR(void);

    // IRenderable interfaces
    TVPRect    GetVPRect();
    TModelRect GetModelRect();
    void       Render(CGlPane& pane);

    void SetHandle(const objects::CBioseq_Handle& handle);
    void SetConfig(CSeqGraphicConfig* config);
    
    void SetRenderPolicy(IPolicy* policy);
    void SetLayoutPolicy(ILayoutPolicy* policy);
    
    void SetSelectedObjects(TConstObjects* objs);
    
    TModelUnit GetHeight(CGlPane& pane);
    const CLayoutObject* HitTest(CGlPane& pane, int x, int y);
    void GetTooltip(const CLayoutObject* obj, string* title) const;
    
    // For CGI mode
    void GetHTMLActiveAreas(CGlPane& pane, IPolicy::TAreaVector* p_areas);

protected:
    objects::CBioseq_Handle  m_Handle;
    CRef<CSeqGraphicConfig>  m_ConfigSettings;
    CRef<IPolicy>            m_RenderPolicy;
    CRef<ILayoutPolicy>      m_LayoutPolicy;
    
    TModelUnit  m_RowCount;
    TModelPoint m_LastClick;
    
    bool x_IsObjectSelected(const CLayoutObject* obj) const;


    // Our layout. The rendering code will draw whatever objects are there.
    // It's up to the panel to fill it with layoutable objects.
    CLayout m_PackedObjects;
    
private:
    
    // Simple grids
    void x_DrawXGrid (CGlPane& pane) const;

    TConstObjects* m_SelectedObjects;

    // main iterator.
    const CLayoutObject* x_MainObjectIterator(CGlPane& pane, 
                    IPolicy::EObj_IterMode mode);
    
    // is it enougth space to sequence letters?
    bool x_IsSeqLettersFit(CGlPane& pane) const;

    void x_DecomposeToLeaves(const CLayoutFeat* feat,
                    vector<CLayoutFeat::TFeatList>& leaves);

    void x_DecomposeToLeaves(const CLayoutFeat* feat,
                    vector<CLayoutFeat::TFeatList>& leaves,
                    CLayoutFeat::TFeatList& this_leaf);    
};




END_NCBI_SCOPE



/*
 * ===========================================================================
 * $Log: features_panel_ir.hpp,v $
 * Revision 1000.2  2004/06/01 19:53:18  gouriano
 * PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.14
 *
 * Revision 1.14  2004/05/14 15:57:13  lebedev
 * Optional argument to specify the type of title/tooltip added
 *
 * Revision 1.13  2004/05/03 12:46:32  dicuccio
 * gui/utils ->gui/objutils where needed
 *
 * Revision 1.12  2004/04/16 14:34:59  dicuccio
 * Use TConstObjects instead of TObjSelection
 *
 * Revision 1.11  2004/03/31 16:09:01  lebedev
 * Methods to get HTML active areas added.
 *
 * Revision 1.10  2004/03/30 13:58:39  lebedev
 * Use elements colors from configuration instead of setting colors directly.
 *
 * Revision 1.9  2004/03/23 12:33:57  lebedev
 * Made sequence and histograms bars a layout objects in the object panel.
 * Made segment map a number of layout objects. Get rid of fixed size rows in the object panel.
 *
 * Revision 1.8  2004/03/11 17:23:38  dicuccio
 * Use TSeqRange instead of TRange.  Deprecated TIndex / TPosition / TDimension
 *
 * Revision 1.7  2004/02/24 14:46:26  lebedev
 * Better implementation of main rendering loop. Code clean-up.
 *
 * Revision 1.6  2004/02/13 18:08:27  lebedev
 * Make use of new LayoutPolicy interface
 *
 * Revision 1.5  2004/01/27 16:13:06  lebedev
 * Changed stored selection from CLayoutObject to CObject
 *
 * Revision 1.4  2004/01/16 18:45:20  dicuccio
 * Minor code reformatting
 *
 * Revision 1.3  2004/01/16 13:37:57  lebedev
 * Tooltips added
 *
 * Revision 1.2  2003/12/30 14:55:00  dicuccio
 * Standardized export specifiers
 *
 * Revision 1.1  2003/12/22 12:52:41  lebedev
 * New files added
 *
 * Revision 1.15  2003/12/16 18:54:09  lebedev
 * Introduced Rendering Policies for feature panels
 *
 * Revision 1.14  2003/12/09 12:32:19  lebedev
 * Trim gene names in overview mode to fit in columns. Option to show feature names in detailed mode
 *
 * Revision 1.13  2003/11/13 19:08:04  lebedev
 * Objects selection reorganized
 *
 * Revision 1.12  2003/11/10 18:47:02  ucko
 * Adjust for const-correctness.
 *
 * Revision 1.11  2003/11/10 18:34:26  ucko
 * Properly capitalize Seq_annot.hpp
 *
 * Revision 1.10  2003/11/10 17:01:21  lebedev
 * Display of SeqGraphs and named SeqAnnots added
 *
 * Revision 1.9  2003/11/04 12:40:07  lebedev
 * Ruler bar added
 *
 * Revision 1.8  2003/10/30 13:22:07  lebedev
 * Display of master sequence under selected CDSs and Proteins added
 *
 * Revision 1.7  2003/10/29 23:39:16  yazhuk
 * Added export macro
 *
 * Revision 1.6  2003/10/28 19:04:09  dicuccio
 * Code clean-up.  Changed storage of CBioseq_Handle from const pointer to value.
 * Changed SFeatByName to use no scope internally.
 *
 * Revision 1.5  2003/10/28 15:27:56  lebedev
 * Removed unused file
 *
 * Revision 1.4  2003/10/22 18:29:08  lebedev
 * Zoom that follows mouse added
 *
 * Revision 1.3  2003/10/21 12:59:44  lebedev
 * Rendering of alignments changed
 *
 * Revision 1.2  2003/10/20 16:31:02  lebedev
 * Offset IRenderable panels to bypass OpenGL matrices precision loss on
 * big sequences.
 *
 * Revision 1.1  2003/10/09 16:25:40  lebedev
 * Initial revision
 *
 * ===========================================================================
 */

#endif  // GUI_WIDGET_SEQ_GRAPHICS___FEATURES_PANEL_IR__HPP