📄 hedit.prl
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#!/usr/local/bin/perl
# This shell script invokes HHEd to perform a global edit of a set
# of models. It must be executed from within the directory holding
# the hmm directories.
#
# Usage: hedit.prl env m n
#
# where m is the index of the source directory and n is the index
# of the target directory. hedit assumes the existence of an edit file
# in the current directory
#
# edfilem.n - containing the required edit commands
#
# Example
#
# cd R3; hedit.prl env 14 21
#
# Edit the models stored in hmm14 and store the new models in
# an MMF in hmm21 using the edit commands stored in edfile14.21
#
# Copyright (c) Steve Young 1992, 1993
# Last Updated 19/10/93
#
# Converted to Perl script by TL 7/1998
#
push @INC, "$ENV{RMSCRIPTS}"; # include the perl script path
require "global.pl"; # include global variables
require "env_conv.pm"; # sub to convert env vars
# Check Number of Args
if ( $#ARGV != 2 ) {
die "Usage: hedit.prl env m n\n";
}
# Read the environment file
$Env_file = $ARGV[0];
if ( ! -f $Env_file ) {
die "htestrm: cannot find environment file $Env_file\n";
}
# convert environment file to perl format
$Perl_env = "HE_env.pl";
&env_conv::env_convert($Env_file,$Perl_env);
# read in variable value from new file in perl format
require "$Perl_env";
$from = $ARGV[1];
$to = $ARGV[2];
$hmm_from = "hmm$from";
$hmm_to = "hmm$to";
if ( -d "$hmm_from" ) {
$src = "-H $hmm_from\\MODELS ";
}
else {
die "No source dir $hmm_from\n";
}
$tgt = "-M $hmm_to ";
if ( ! -d $hmm_to ) {
mkdir $hmm_to, 0755;
}
if ( ! -f $HMMLIST ) {
die "List of models to edit $HMMLIST does not exist\n";
}
$edit_file = "edfile$from.$to";
if ( ! -f $edit_file ) {
die "Edit command file $edit_file does not exist\n";
}
if (defined $HHTRACE) {
$OPT = "-T $HHTRACE ";
}
else {
$OPT = "-T 1 ";
}
# remove perl environment variable file
unlink $Perl_env;
system("HHEd -A -C $HECONFIG $OPT $src $tgt $edit_file $HMMLIST");
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