pr00058_res.txt

greedy em 混和模型训练算法

-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.048e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +8.460e+001 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +5.484e+000 -1.397e+003 +2.943e+002 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.846e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 +4.081e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
+1.745e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +1.532e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +2.756e+001 +3.055e+002 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.842e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.846e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
+2.423e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +5.322e+001 +9.078e+001 -1.397e+003 +1.999e+002 -1.397e+003 -1.397e+003 +9.912e+001 -1.397e+003 -1.397e+003 +1.276e+002 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.536e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +4.276e+002 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +2.639e+002 +3.860e+002 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +4.276e+002 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.842e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
+1.423e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.400e+002 -1.397e+003 -1.397e+003 -4.641e+001 +2.961e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +2.323e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +2.536e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +5.322e+001 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.962e+002 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +4.726e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
+4.234e+001 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.649e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
+3.330e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +5.484e+000 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +2.653e+002 +5.169e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 

 Motif 6 results

[*] Motif occurrences 
----------------------
Seq   Start  substring 
 1    53    VRFSNRFVTCQIVSSRVNGD
 2    52    VRVTNRDIICQIAYARIEGD
 3    53    VRFSNRFVTCQIVSSRVNGD
 4    52    VRVTNRDIICQIAYARIEGD
 5    53    VRLSNRDITCQIAYRRIEGD
 6    53    VRLSNKDVTCQVAYSRIEGD
 7    53    VRITNKDVVAQLAYSKIEGD
 8    52    VRVTNRDIICQIAYARIEGD
 9    53    VRFSNKNVTCQIVYSTIQGD
 10    53    VRFSNRDITCQVAYSRIEGD
 11    52    VRVTNRDIICQIAYARIEGD
 12    53    VRFTNRDIILQIVSSEITGD
 13    54    VRFTNKDITAQIVYATIAGD
 14    52    VRVTNRDIICQIAYARIEGD
 15    52    VRFTNKDIVCQIAYARIEGD
 16    53    VRFTNKDIICQIISSTITGD

Consensus:   VRFTNRDITCQIAYSRIEGD 

[*] Position Weight Matrix
--------------------------
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.9999 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.9999 0.0000 0.0000 0.0000 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.5000 0.0000 0.0000 0.0625 0.0000 0.1250 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.3125 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.3750 0.6250 0.0000 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.9999 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.3750 0.0000 0.0000 0.0000 0.0000 0.0000 0.6250 0.0000 0.0000 0.0000 0.0000 0.0000 
0.0000 0.0000 0.8125 0.0000 0.1250 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0625 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.6875 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.3125 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.4375 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.4375 0.1250 0.0000 0.0000 
0.1250 0.8124 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0625 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.9999 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.8125 0.0000 0.0625 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.1250 0.0000 0.0000 
0.6250 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0625 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.3125 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.2500 0.0000 0.0000 0.0000 0.7500 
0.4375 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0625 0.5000 0.0000 0.0000 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0625 0.0000 0.0000 0.0000 0.0000 0.0625 0.0000 0.0000 0.0000 0.0000 0.0000 0.6875 0.0000 0.1875 0.0000 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.8749 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.1250 0.0000 0.0000 
0.0625 0.0000 0.0000 0.6250 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.1250 0.0000 0.0625 0.0000 0.0000 0.1250 0.0000 0.0000 0.0000 
0.0000 0.0000 0.0000 0.0000 0.0000 0.9999 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 
0.0000 0.0000 0.9999 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 

[*] Position Specific Scoring Matrix
------------------------------------
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +4.055e+002 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.536e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.726e+002 -1.397e+003 -1.397e+003 +5.322e+001 -1.397e+003 +8.460e+001 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +2.377e+002 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.224e+002 +3.597e+002 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +4.815e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
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-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.340e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.083e+002 +1.055e+002 -1.397e+003 -1.397e+003 
+4.234e+001 +6.325e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.540e+001 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
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+2.745e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +5.322e+001 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +2.377e+002 -1.397e+003 -1.397e+003 
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-1.397e+003 -1.397e+003 -1.397e+003 -2.219e+001 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -6.770e+001 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +2.995e+002 -1.397e+003 +1.861e+002 -1.397e+003 -1.397e+003 -1.397e+003 
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-5.765e+001 -1.397e+003 -1.397e+003 +3.100e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +1.815e+002 -1.397e+003 +9.912e+001 -1.397e+003 -1.397e+003 +1.276e+002 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 +3.842e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 
-1.397e+003 -1.397e+003 +4.081e+002 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 -1.397e+003 

 Motif 7 results

[*] Motif occurrences 
----------------------
Seq   Start  substring 
 1    208    MEMLIDDDEERYQKQFSGLI
 2    207    MRLLMEEDEDAYKKQFSQYI
 3    208    MEMLIDDDEERYQKQFSGLI
 4    207    MRLLMEEDEDAYKKQFSQYI
 5    208    MRTLEEEDEEAFKRQFSKYI
 6    208    MRSLEQDDEDSFKRQFSKYI
 7    207    MTYLKEEDEDRYKRQFSKFL
 8    207    MRYLMEEDEDAYKKQFSQYI
 10    208    MRQLAEEDDEAYKRQFSQYI
 11    207    MRYLMEEDEDAYKKQFSQYI
 12    211    METLADDDEERYKSQFNRYI
 14    207    MRYLMEEDEDAYKKQFSQYI
 15    207    MKELEEEDEEAFKRQFSQYI

Consensus:   MRYLMEEDEDAYKKQFSQYI